Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu10g01002 ATGGAGCATTTGGGTCAGGTTGGTTTAAATTGTGAGCTAGGAAATGGAGTCAGCATGTGTGGTAATGAAGAGTGCCTTCAGAAAGAGACCAATACAACTTCCATTGAAGATGCTGTCAAAGTCTTGTTGATGGGTTTAGGGGAAGATATCAACAGAGAAGGCATTAGAAAGACACCACTTCGTGTTGCCAAAGCCCTTTGTGAAGGAACCAGAGGTTATATTCAAAGTGTTAAGGAAATTGTAGAAGGTGCATTGTTCCCAGAGGCTGGTCTAGACAATGCAGAAGTTGGTCATGCAGGTGGAGTAGGAGGACTAGTGATTGTGAGAGATCTTGATTTCTATTCCTACTGTGAGTCTTGCATGTTACCATTCTATTTCAAGTGTCATGTAGGTTATGTCCCTTCTGGCCAAAGAGTTTTGGGTTTAAGCAAGCTCTCTCGTGTGGCTAATGTGTTTGCCAAGCAACTCCAAGAACCTCAGCGTCTAGCAAATGAGGTGTGTTCTGCATTGCATGAAGGCATACAACCCACTGGTGTTGCTGTTGTGCTTCAATGTGAACACATTCCCTTTCCAGACATAGAATCAAACTCTCTTGACTCAAACCACAAAGGGGTGGTGGGGATACTGGTTTCTTCAGGTTCTGGTGCTTTTGCAAACAAAGAGGCGGATATATGGGGTGACTTTTTTAGCCTCCTTAACTTCAGAGGTATTGACAAGGATAAAATTCTTGATAAGGGATTGCTGGACCAATGTTGGTGTCCTTCTTTGTCTTCTAAAGTTTCACCGAAGAATGAAGAAATGAACCCTATGATGGTCACTGCAGTAGCTTCAATTCTTAGATCTTTAGGTGAGGACCCAACTAGGAAGGAATTACAAGGAACTCCTGATAGATATACCAAATGGCTGATGAACTTCCAATGTAGTAGCATTGAAACGCATCTGAAGGGTTCGCTTTGTACTGGGATAAATGGTGCTTTGGACACTAATGAGGAGGTAGGTTTTGATGAAAAGCTATACTCAGAGTTGAACTTGCCTTTTTTGTCACAGTGTGAGCATCATTTACTTCCATTTTATGGTGTTGTTCACATAGGATGCTACATTTCCAAAGGGTTTCACCCCATTGAGAAAACCCTTTTGCAGTCAATAGTGCACTTCTATGGTTTGAAGCTCCAGGTTCAAGAAAGGCTAACCAAGCAGATAGCAGAAACCATTTCTCCACTGATAGGTGGAAATGTGATAGTAGTGGTGGAAGCAAGTCACACATGCATGATGTCAAGAGGAATAGAGAAGTTTGGTAGTAATACAGCTACCATTGCTGCACTGGGACGCTTCTCAAGTGATCTTGCTGCAAGAGCAGCGTTCCTGGAGAGTATTCCAAGTGCTATATCTCTTTAA 1395 0.4251 MEHLGQVGLNCELGNGVSMCGNEECLQKETNTTSIEDAVKVLLMGLGEDINREGIRKTPLRVAKALCEGTRGYIQSVKEIVEGALFPEAGLDNAEVGHAGGVGGLVIVRDLDFYSYCESCMLPFYFKCHVGYVPSGQRVLGLSKLSRVANVFAKQLQEPQRLANEVCSALHEGIQPTGVAVVLQCEHIPFPDIESNSLDSNHKGVVGILVSSGSGAFANKEADIWGDFFSLLNFRGIDKDKILDKGLLDQCWCPSLSSKVSPKNEEMNPMMVTAVASILRSLGEDPTRKELQGTPDRYTKWLMNFQCSSIETHLKGSLCTGINGALDTNEEVGFDEKLYSELNLPFLSQCEHHLLPFYGVVHIGCYISKGFHPIEKTLLQSIVHFYGLKLQVQERLTKQIAETISPLIGGNVIVVVEASHTCMMSRGIEKFGSNTATIAALGRFSSDLAARAAFLESIPSAISL* 465
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu10g01002 464 Gene3D - 99 235 IPR043133 -
Lapu10g01002 464 Gene3D - 329 460 IPR043133 -
Lapu10g01002 464 SUPERFAMILY Tetrahydrobiopterin biosynthesis enzymes-like 253 459 - -
Lapu10g01002 464 Pfam GTP cyclohydrolase I 35 188 IPR020602 -
Lapu10g01002 464 Pfam GTP cyclohydrolase I 273 458 IPR020602 -
Lapu10g01002 464 PANTHER GTP CYCLOHYDROLASE I 26 188 IPR001474 GO:0003934|GO:0046654
Lapu10g01002 464 FunFam GTP cyclohydrolase 1 100 235 - -
Lapu10g01002 464 Gene3D - 23 80 IPR043134 -
Lapu10g01002 464 Gene3D - 259 311 IPR043134 -
Lapu10g01002 464 SUPERFAMILY Tetrahydrobiopterin biosynthesis enzymes-like 23 190 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu10g01002 Lapu-Chr10 11779166 11784326 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu10g01002 K01495 - gmx:100792313 680.633
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu1g02099 1 35019196 35023585 Lapu10g01002 10 11779166 11784326 PCT