Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu10g00998 ATGGCACTTATGAAATTCAAAGAATCAATATCCAGAGACCCAAATGGGATCTTGCTTTCTTGGAATATTTCTACTCATTTCTGTAATTGGCATGGAGTCACATGCAATCACACACTTCAAAGGGTTACTGAGCTGAACTTGCAAGGGTACAGGTTGAAAGGTTACATATCTCCTCACATTGGTAATCTCTCTTACATGAGAAAATTTAAACTTGGAAACAACAGTTTCTATGGCAATATCCCACCAGAAGTGGGACGATTGTCCCAATTGCAGTATTTTAGACTTGAAAATAACACACTGGTAGGAGAAATTCCTTTGAATTTGACATATTGTACTCAACTCAAAGTTTTATATTTGTATGGAAACAATCTGACGGGAAAAATACCTACTGAAATCGGATTACTCCGGAAGATTCAGCGTTTGAACTTTGGTCAAAACCAGTTCACAGGAGAAGTTCCATCATCCATCGGTAATCTTTCTTCAATAACATATTTCTCTCTTACTTTAAACAATCTAGAGGGAGGTATTCCACCAGAAATATGTCATCTCAAAAGCTTGACCATTGTAGGTTTGGGTATCAACAAACTGACTGGATCAGTTCCTTCTTGTCTTTATAATATGTCATCTCTTATTGCAATCTCATTTGAAGAAAATCAATTTAATGGCTCTCTTCCACCTAACATGTTCCACACCCTCCAGAATCTCCAGGGACTTGTGCTTGGTGGTAATCAATTCTCAGGTCCAATCCCACCTTCCATTGCAAATGCATCCACCCTTTCACTTCTTGACATTCTTGAAAACCATTTTGTGGGAAGAATTCCAAGTCTTGGAAAACTACAAGATCTTTATTACCTCGATTTGGCCAGTAACGATTTAGGTTACACTTCAAGTAATGATTTGGACTTTTTAAAATCATTGGTAAATTGTACTAAGTTGGAAGCTTTAGTTCTACATTCCAATAATTTTGGAGGTCATTTGCCAAATTCTTTGGGAAATTTATCCACCCTACTAAGTGAACTATATCTCGGATATAATGAGATATCTGGAGAAATCCCTGAGGCAATAGGAAATTTAGTTGGCTTAAATCTCTTGTCAATATACAATACCCACATTAATGGGATTATCCCAACAACTTTTGGAAAGTTAAAAATGGTTCGAGTGTTAGGTTTAGGGGGAAACAAGTTGTCAGGAAAGATAGAACCCTTCATTGGAAACCTTAGTCAATTGTTTCATTTGAACCTACGAGCAAATCGATTTGAAGGGAGTATTCCTCCAAGTATAGGAAATTGCCAAATGCTGCAATATTTAGATCTTTCACTGAACAATCTCACAGGAGCCATACCATTAGAGGTTTTTAATCTTTCCTCTCTAACTTACACGTTGGATTTGTCCCAAAACTCATTGAATGGTAGTATACCAGAAGAAGTGGGAAAGATAAAGAATATTGACTTTCTAGATATGTCCTACAATCATATCTCCGGTCACATTCCTAGTGGTATTGGAGAATGCATAATGTTAGAATACCTCTATTTGCAAGGGAATTCTTTACAAGGAATCATACCATCTTCTTTGGCATCACTTACAAGTATTCTACGTTTGGATCTGTCACAAAACCGTTTGTCTGGATCAATTCCAAATGTTCTGCAAAACCTTTCTTTCTTACATTATTTGGATGTATCTTTTAACATGTTGGAAGGTGAGGTACCCACTGAAGGTGTCTTTCGAAATGTAAGTGCATTGGTGGTGACTGGAAACAGTAAGCTTTGCGGAGGTATTTCTGAATTGCATCTACCACCATGCCCTGTTAAAAATAAGAAACATGCAAAACACCGCAAGTTTGGATTGATAGCAGTGATATTAAGTGTAGCTGTTTTTGTTATTGTACTATCATCTACTTTATTGATCTATTGGTCGAGGAAAAAGGGAAAGAAACCTTCGCTTAATTTACCAACGATTGACCAATTGGCCAAAGTTTCCTACCAAAGCTTATACAATGGAACTGATGGGTTCTCAACTGCAAACTTAATAGGGTATGGAAATTTTAGTTCTGTCTACAAAGGAACTCTCGAGTTCGAAGACAAAGTTGTTGCCATAAAGGTTCTAGACTTGCAAGTAAAAGGAGCTCACAAGAGCTTCTTAGCAGAATGTAATGCACTGAAAAACATTAAACATCGAAATCTTGTTCCGATTTTGACATGTTGTTCCAGCACAGATTATAAAGGTCAAGAATTCAAAGCTTTAATCTTTGAGTACTTGAGAAATGGAAGCTTAGAGCAATGGTTGCACCCTACCATAACAAGTGTTGAGCAACCAAGAACATTGAGCCTTAATCAAAGATTAAGTATAATGATTGACATAGTTTCTGCATTACAATATCTTCATCATGAATGTGAGCAATTGATCATTCATTGTGATTTAAAGCCAAGCAATGTCCTTCTTGATGATGACATGACTGCTCATGTAAGTGATTTTGGCATAGCAAGACTTCTTTCAAGAATCAAAGGTATCACCTCTAAGCAATCAAGCACACTTGCAATAAAGGGGACTGTTGGCTATGCTCCTCCAGAGTATGGAGTGGGTTCTGAAGTGTCAACTTGTGGCGACATGTACAGCTTTGGAATTCTTATCTTGGAAATGCTTACTGGGAGAAGACCAACTGATGAAATGTTTGAAGATGGTCAAAACATTTGTAACTTTGTTGCGATTTCATTTCCCAGCAAACTTTTTCAAATTTTGGATCCGCAACTTATTCCAATTGAGGGAAACCATTGGAATCTTAATCCAAATGTTGAGAAGTGCTTAGTTTCACTTTTTAGGATTGGACTCGCCTGTGCAACGGAGTCACCAAAAGAAAGAATGAATGTGGTTGATGTTAGCAGGGAGCTTCATCGAATCCAAAAGAGCTTTGTTGGTGAGTTTATTCTTTTGTATTATCTATCTTTTAATAAATTATTTCACAATTACATCAAGTTTTCCTTTTTA 2982 0.3685 MALMKFKESISRDPNGILLSWNISTHFCNWHGVTCNHTLQRVTELNLQGYRLKGYISPHIGNLSYMRKFKLGNNSFYGNIPPEVGRLSQLQYFRLENNTLVGEIPLNLTYCTQLKVLYLYGNNLTGKIPTEIGLLRKIQRLNFGQNQFTGEVPSSIGNLSSITYFSLTLNNLEGGIPPEICHLKSLTIVGLGINKLTGSVPSCLYNMSSLIAISFEENQFNGSLPPNMFHTLQNLQGLVLGGNQFSGPIPPSIANASTLSLLDILENHFVGRIPSLGKLQDLYYLDLASNDLGYTSSNDLDFLKSLVNCTKLEALVLHSNNFGGHLPNSLGNLSTLLSELYLGYNEISGEIPEAIGNLVGLNLLSIYNTHINGIIPTTFGKLKMVRVLGLGGNKLSGKIEPFIGNLSQLFHLNLRANRFEGSIPPSIGNCQMLQYLDLSLNNLTGAIPLEVFNLSSLTYTLDLSQNSLNGSIPEEVGKIKNIDFLDMSYNHISGHIPSGIGECIMLEYLYLQGNSLQGIIPSSLASLTSILRLDLSQNRLSGSIPNVLQNLSFLHYLDVSFNMLEGEVPTEGVFRNVSALVVTGNSKLCGGISELHLPPCPVKNKKHAKHRKFGLIAVILSVAVFVIVLSSTLLIYWSRKKGKKPSLNLPTIDQLAKVSYQSLYNGTDGFSTANLIGYGNFSSVYKGTLEFEDKVVAIKVLDLQVKGAHKSFLAECNALKNIKHRNLVPILTCCSSTDYKGQEFKALIFEYLRNGSLEQWLHPTITSVEQPRTLSLNQRLSIMIDIVSALQYLHHECEQLIIHCDLKPSNVLLDDDMTAHVSDFGIARLLSRIKGITSKQSSTLAIKGTVGYAPPEYGVGSEVSTCGDMYSFGILILEMLTGRRPTDEMFEDGQNICNFVAISFPSKLFQILDPQLIPIEGNHWNLNPNVEKCLVSLFRIGLACATESPKERMNVVDVSRELHRIQKSFVGEFILLYYLSFNKLFHNYIKFSFL 994
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu10g00998 994 Pfam Leucine rich repeat N-terminal domain 2 36 IPR013210 -
Lapu10g00998 994 ProSitePatterns Serine/Threonine protein kinases active-site signature. 801 813 IPR008271 GO:0004672|GO:0006468
Lapu10g00998 994 FunFam LRR receptor-like serine/threonine-protein kinase EFR 298 606 - -
Lapu10g00998 994 SUPERFAMILY L domain-like 336 590 - -
Lapu10g00998 994 Gene3D Ribonuclease Inhibitor 296 601 IPR032675 -
Lapu10g00998 994 Gene3D Ribonuclease Inhibitor 56 295 IPR032675 -
Lapu10g00998 994 Gene3D Ribonuclease Inhibitor 1 55 IPR032675 -
Lapu10g00998 994 Gene3D Phosphorylase Kinase; domain 1 651 751 - -
Lapu10g00998 994 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 1 156 - -
Lapu10g00998 994 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 752 973 - -
Lapu10g00998 994 ProSiteProfiles Protein kinase domain profile. 670 970 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu10g00998 994 FunFam Leucine-rich repeat receptor protein kinase EMS1 176 275 - -
Lapu10g00998 994 SUPERFAMILY Protein kinase-like (PK-like) 645 962 IPR011009 -
Lapu10g00998 994 Pfam Protein kinase domain 672 919 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu10g00998 994 FunFam LRR receptor-like serine/threonine-protein kinase EFR 641 751 - -
Lapu10g00998 994 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 304 963 - -
Lapu10g00998 994 Gene3D Transferase(Phosphotransferase) domain 1 752 972 - -
Lapu10g00998 994 SMART serkin_6 670 970 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu10g00998 994 SUPERFAMILY L domain-like 2 292 - -
Lapu10g00998 994 ProSitePatterns Protein kinases ATP-binding region signature. 676 699 IPR017441 GO:0005524
Lapu10g00998 994 Pfam Leucine rich repeat 506 564 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu10g00998 Lapu-Chr10 11705234 11708330 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu10g00998 2 969 Receptor kinase-like Gene Family AT3G47570 44.740 0.0 798
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Lapu10g00998 Pkinase 6.6e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu10g00998 - - vun:114166412 1452.57