Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu10g00930 ATGGCTTCAAGATCTGGTACTAATGCATGGCCTTACCCCATCAAAACGATCGTCGTTTTGGTTCAAGAAAACCGTTCATTTGACCACATGTTGGGTTGGATGAAGTCCATCAACCCAGAAATCGATGGGGTCACAGGTTCGGAGTCAAACCCGATTTCCACCTCGGAGCCCAACGCGAGCCGGGTTTATTTTTCCGACCAGTCTGATTTTGTCGAACCGGACCCGGGTCACACGGTGGAGGATGTGTACGAGCAAGTTTTCGGCGAACCGTGGAGCGAATCGTCGATGGCAAAGAAAGTGTCGCCGAGTATGGAAGGGTTCGCCCAAAACTCGGTGAAGCAGAAGAAGGGATCAACGGCGGAGACGGTGATGAACGGGTACAAACCGGATCTGTTACCGGTTTATAGAGAGTTGGTTAAGGAGTTTGCGGTGTGTGATCGGTGGTTTGCTTCGGTTCCCGGTCCGACCCAACCGAACCGGCTTTACGTTCACTCTGCGACGTCGCATGGGTTGACCACTCAGGATACAAAGAAACTTATTGGAGGTTTGCCACAGAAGACTATATTTGATTCTTTGGACGAAAATGGGTTCAGTTTTGGAATATATTACCAATACCCACCATCTACTCTTTTTTATAGAAACCTTAGGAAAGTGAAATACACAGACAACTTTCATTTGTTCGATTTAAAGTTCAAGAAGCATTGTGAAGAAGGGAAATTGGAAAACTATGTGGTGATTGAGCAAAGATATTTTGACTTGTTATCAGTGCCTGCAAATGATGATCATCCATCTCATGATGTTGGTGAGGGACAAAGGTTTGTGAAGGAAGTGTACGAGGCACTGAGAAGAAGTCCTCAGTGGAATGAAATGTTGTTTGTGATTACATATGACGAGCATGGAGGGTTCTATGATCATGTGCCAACACCTGTGGATGGAGTTCCAAACCCAGATGACATTGCAGGTCCTCAACCCTTCAAGTTTCAGTTTGATAGACTTGGTGTTAGGGTTCCCACCATCCTTATTTCTCCATGGATTGAAGCAGGAAAAGTGTTGCATGAACCTTCTGGGCCATTCCCAACATCACAGTATGAACATTCATCAATACCAGCAACTGTGAAGAAAATATTCAATCTTCCTCAGTTCTTGACAAAGCGTGATGCATGGGCTGGAACATTCGAAAATCTCTTATCTCTCACCACTCCACGTACTGATTGTCCAGTGCAGTTGCCTGAGCCTATTAAACTACGAGAGGTTGGTGCTGCAGAAGATGCAGAATTGAGTGAGTTTCAGGAAGAACTGATATACATGACAGCAACTTTAAATGGTGATCATAATAAGAGTACATACCCCAAACTAACACAGAATATAACTGTTTCAGAAGCAGTTAAGTACTGTGAAGATGCATTTCAAACATTCTTGAATGAGTGTGAGAAGGCAAAGCAAAGTAAAATTGATGGATCTGAAATTGTTCACTGTGCAAAGCCACACACAGCTCCACAATCCACAAGTTTCTTGCACAAGATGTTGTCTTGTATATTATGTAAAGATTAA 1551 0.4378 MASRSGTNAWPYPIKTIVVLVQENRSFDHMLGWMKSINPEIDGVTGSESNPISTSEPNASRVYFSDQSDFVEPDPGHTVEDVYEQVFGEPWSESSMAKKVSPSMEGFAQNSVKQKKGSTAETVMNGYKPDLLPVYRELVKEFAVCDRWFASVPGPTQPNRLYVHSATSHGLTTQDTKKLIGGLPQKTIFDSLDENGFSFGIYYQYPPSTLFYRNLRKVKYTDNFHLFDLKFKKHCEEGKLENYVVIEQRYFDLLSVPANDDHPSHDVGEGQRFVKEVYEALRRSPQWNEMLFVITYDEHGGFYDHVPTPVDGVPNPDDIAGPQPFKFQFDRLGVRVPTILISPWIEAGKVLHEPSGPFPTSQYEHSSIPATVKKIFNLPQFLTKRDAWAGTFENLLSLTTPRTDCPVQLPEPIKLREVGAAEDAELSEFQEELIYMTATLNGDHNKSTYPKLTQNITVSEAVKYCEDAFQTFLNECEKAKQSKIDGSEIVHCAKPHTAPQSTSFLHKMLSCILCKD* 517
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu10g00930 516 PANTHER NON-SPECIFIC PHOSPHOLIPASE C4-RELATED 10 476 IPR007312 GO:0016788
Lapu10g00930 516 SUPERFAMILY Alkaline phosphatase-like 180 354 IPR017850 -
Lapu10g00930 516 Gene3D Alkaline Phosphatase, subunit A 7 190 IPR017850 -
Lapu10g00930 516 Gene3D Alkaline Phosphatase, subunit A 240 422 IPR017850 -
Lapu10g00930 516 FunFam Non-specific phospholipase C1 5 185 - -
Lapu10g00930 516 Pfam Phosphoesterase family 14 379 IPR007312 GO:0016788
Lapu10g00930 516 FunFam Non-specific phospholipase C1 239 424 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu10g00930 Lapu-Chr10 11080555 11085058 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu10g00930 12 516 Acyl Lipid Metabolism Gene Families AT3G03530 62.121 0.0 667
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu10g00930 K01114 - gmx:100789421 943.34