Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu10g00929 ATGGCTTCACTCTCCGAAGGCGATCACCAACAGATTCTGGTGGAGCGTAGATCACATGCGAGAGTTTTGACCTTAAACAGGCCTAAGCAGTTGAATGCCCTCTCTTTTTATATGGTTTCTCGATTGCTTGAAGTTTTTTCTGAGGATGAGGAAAATTCTGATATTAAATTGGTTGTCGTGAAGGGAAATGGAAGGGCTTTTTGTGCTGGTGGTGATGTGGCAGCTGTTGCTCGTGAAGGAACTAAAGGTGACTGGAGGAGTGGTGCAAAATTTTTTCATACTGAATATAGATTGAATTATTTGATGGCAACATATAGTAAGCCCCAGGTTTCCATTCTTAATGGAATTGTCATGGGAGGTGGTGCTGGTGCTTCTGTACATGGAAGATTTCGTGTTGTTACAGAGAATACGGTCTTTGCAATGCCAGAAACAGCTTTGGGTTTATTTCCTGATGTAGGTGCCGCATATTTCTTGTCTAGACTGCCTGGCTTTTTTGGAGAATATGTTGGTCTTACAGGTGCTAGGTTGAATGGTGCTGAAATGCTTGCTTGTGGTCTTGCAACACATTTTGTTCCTTCATCGAAATTATCTTTATTGGAAGAAGCATTATGCAAGGTGGAAACTAGTGATCCAAATGCAGTGTCTGCAATTATCGATAAGTACTCACAGCAACCTTTCCTAAAAGGCGACAGTGTTTATCACAGGATGGATGTGATCAACAAGTGCTTCTCAAGAAAATCAATCGAGGAAATAATATCTTCTCTTGAGATAGAAGCTATGGGTAAGGTTGATCATTGGATTTCTGAAACTGTTCAAACCTTAAAGAAAGCATCTCCAACAAGCCTTAAAATCTTTCTTAGATTGATTAGAGAAGTCAGGCTCCTAGGTATTGGTCCATGCCTTGTTCTTGAATATAGAATTGTTTGTCATATTCTAAAAGGACACTACAGCAAGGATTTCTTTGAGGGTTGTAGGGCTATACTGTTGGATAAAGACAGGAACCCAAAGTGGGAACCTTCCAAATTGGAGCTTCTTAGTGATAGCGATGTTGACCGTTACTTCTCTAAGCTTGATGATGAAGAATGGGAAGATTTGGAATTTCCTAAAAGGTTCAACAATCTGCCTACATATGCTATTTCAAAGCTGTAA 1149 0.4012 MASLSEGDHQQILVERRSHARVLTLNRPKQLNALSFYMVSRLLEVFSEDEENSDIKLVVVKGNGRAFCAGGDVAAVAREGTKGDWRSGAKFFHTEYRLNYLMATYSKPQVSILNGIVMGGGAGASVHGRFRVVTENTVFAMPETALGLFPDVGAAYFLSRLPGFFGEYVGLTGARLNGAEMLACGLATHFVPSSKLSLLEEALCKVETSDPNAVSAIIDKYSQQPFLKGDSVYHRMDVINKCFSRKSIEEIISSLEIEAMGKVDHWISETVQTLKKASPTSLKIFLRLIREVRLLGIGPCLVLEYRIVCHILKGHYSKDFFEGCRAILLDKDRNPKWEPSKLELLSDSDVDRYFSKLDDEEWEDLEFPKRFNNLPTYAISKL* 383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu10g00929 382 Gene3D - 7 371 - -
Lapu10g00929 382 FunFam Probable 3-hydroxyisobutyryl-CoA hydrolase 2 6 371 - -
Lapu10g00929 382 Pfam Enoyl-CoA hydratase/isomerase 21 354 IPR045004 -
Lapu10g00929 382 CDD crotonase-like 12 203 - -
Lapu10g00929 382 PANTHER 3-HYDROXYISOBUTYRYL-COA HYDROLASE-RELATED 8 379 IPR032259 GO:0003860
Lapu10g00929 382 SUPERFAMILY ClpP/crotonase 9 340 IPR029045 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu10g00929 Lapu-Chr10 11060528 11075758 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu10g00929 9 382 Miscellaneous Gene Families AT5G65940 67.112 0.0 538
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu10g00929 K05605 - gmx:100170729 649.432
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu10g00929 10 11060528 11075758 Lapu10g00929 10 11060528 11075758 ECH