Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu10g00922 ATGAAGGGTGGTGTGAAGAGAAAGGCTACCACGGAGGTTCCCACCGAGGTGGTTGAGCCTTCTGGTGCTGAGGATTTGGGAGGTGGAGAGGGTGGGAGTCTGCAAGTTCAAAGCTTTGAGGGGAACGAGGGTACCCAGTTGCGGAACGGTGAGGATGAGGAACCCCAAGTGGAGGATTCTGAAGGGGAGGGCGAGGAAGGAGAAGGCATAGGGGAAGGGGAAGAAGAGGATGGCGTGGAGGGAGACGAAGAAGAGGAAAATGTTGGTGGTTCATTTCCAGGGGCTCAAGGTGTTGTTCTTGCTGAGAATTTTTATGAAGTTGAAGCTATTCGTCGTAAGAGGGTACGCAAGGGTCAGGTGCAATACTTTATCAAATGGAATGGGTGGCCTGAGACAGCCAACACTTGGGAGCCGCCAGAAAATCTAGTTTCTGTTCCTGATGTTGTTGAAGCTTTTGAGGAGAGCTTGAAATCAGGAAAACATCGCAAGCGCAAACGCAAGCACGTGGTGCATCATACTCAACCCAAGAAGCGGCTGGAGCGTTCTACCACTCCGTATAGCCTTCGACGTTTTTCAGCTAGTACTTCTGAGAACCATACCCAGTCTGCTCCTCCTGTTCTTAATGATGCTAGCCTTCCTGTTGTTATTCCCGCCTTTCCTCAGACTGTTCTTTTTGCTGATGAAGTGGGAAATGGTGTTGGAAGCAATCTTAGAAATGCTACACCTGATAATGTTAACAAGTCTGCAATTGGTTCAGAACAAAATATTGAAAGGAATGAGGAAAATGATTATGATCCTAAACTTAGTGAGCTTAAAGCTTCTTCTGCCTGTGGGAATGATGCAGACAGGCTTGCAATACGGATTCCAGAAGCAAAAGTTCCTTCTGGTCCTGGATTTGCTGGCAATAATGGTCAAACAGTTGCTAAATCAAAGGGTGTTCGCTTGGAAACAAGTGAAAGTGGCCGCTGCCGGGGAGCCAAAAGGAGAAAATCTGGTTCTGTTAGGAGATTCAACAAAGAATTATATGCTGGTGAGCCTGTCAATACACAAAATCCAATTGGAGCAGCTGTTAGTACAGCTGAGTCAGCTGTACTAACGAGGAATTCTGGTAGTGGTGCTAATCATGCCAGACCTGCTAGCAATATCGTAAAGATTATAAAGCCAATAGGCTATTCAGCTACTGTAGCCAGTGGAACACAGGATGTGTTGGTAACCTTTGTGGCTTCGAAGTCTGATGGAACAGAAGTGATGGTTAACAACAAGTATCTAAAAGCATTTAATCCACTTCTGCTCATCAATTTCTATGAGCAGCATCTTCGCTACAGCCCTACATTGACCGAATAA 1344 0.4621 MKGGVKRKATTEVPTEVVEPSGAEDLGGGEGGSLQVQSFEGNEGTQLRNGEDEEPQVEDSEGEGEEGEGIGEGEEEDGVEGDEEEENVGGSFPGAQGVVLAENFYEVEAIRRKRVRKGQVQYFIKWNGWPETANTWEPPENLVSVPDVVEAFEESLKSGKHRKRKRKHVVHHTQPKKRLERSTTPYSLRRFSASTSENHTQSAPPVLNDASLPVVIPAFPQTVLFADEVGNGVGSNLRNATPDNVNKSAIGSEQNIERNEENDYDPKLSELKASSACGNDADRLAIRIPEAKVPSGPGFAGNNGQTVAKSKGVRLETSESGRCRGAKRRKSGSVRRFNKELYAGEPVNTQNPIGAAVSTAESAVLTRNSGSGANHARPASNIVKIIKPIGYSATVASGTQDVLVTFVASKSDGTEVMVNNKYLKAFNPLLLINFYEQHLRYSPTLTE* 448
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu10g00922 447 MobiDBLite consensus disorder prediction 156 186 - -
Lapu10g00922 447 SMART ChS_2 371 444 IPR008251 GO:0005634
Lapu10g00922 447 MobiDBLite consensus disorder prediction 299 313 - -
Lapu10g00922 447 ProSitePatterns Chromo domain signature. 122 142 IPR023779 -
Lapu10g00922 447 MobiDBLite consensus disorder prediction 296 330 - -
Lapu10g00922 447 SUPERFAMILY Chromo domain-like 97 162 IPR016197 -
Lapu10g00922 447 ProSiteProfiles Chromo and chromo shadow domain profile. 105 164 IPR000953 -
Lapu10g00922 447 CDD CD_CSD 105 154 - -
Lapu10g00922 447 Gene3D - 73 157 - -
Lapu10g00922 447 SMART chromo_7 104 157 IPR000953 -
Lapu10g00922 447 PANTHER CHROMO DOMAIN-CONTAINING PROTEIN LHP1 1 444 IPR044251 GO:0006325|GO:0031507
Lapu10g00922 447 MobiDBLite consensus disorder prediction 54 87 - -
Lapu10g00922 447 MobiDBLite consensus disorder prediction 159 175 - -
Lapu10g00922 447 MobiDBLite consensus disorder prediction 1 94 - -
Lapu10g00922 447 MobiDBLite consensus disorder prediction 236 263 - -
Lapu10g00922 447 Pfam Chromo (CHRromatin Organisation MOdifier) domain 105 154 IPR023780 -
Lapu10g00922 447 PRINTS Chromodomain signature 102 110 IPR017984 -
Lapu10g00922 447 PRINTS Chromodomain signature 115 129 IPR017984 -
Lapu10g00922 447 PRINTS Chromodomain signature 130 142 IPR017984 -
Lapu10g00922 447 MobiDBLite consensus disorder prediction 236 253 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu10g00922 Lapu-Chr10 11001079 11010204 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu10g00922 - - gmx:100782342 552.362