Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu10g00906 ATGGCCCTTCAAGCTTTTTGTGGCTCTGCATGTTGTTTCCATTCCCACCTTCTTCACTGTTCTTCCACTACTGCATCCCCAAAATTCCTTGCTGCAAGGAGGTTCCAGTCATGCCCTTCAACTAGAAAATCTCTCAAATTGAATTGTAGTTCAAGTGGCAACAATGACGACCAAGATTATCTTCTGGATGCTCCAGTTTCTGCTGGTGATGGATTCTCTTTCAGTGGAGGAAAGTATTCAGATGGGCCAAGTCCAAGTGATGAATGGTTTAAGCAAGGAAAAATGGTTAAAGCCTATTCAATTCCTGGCACTGGTGAAAAGGCGAAAGATCCAATTTTTGGACTTGCTATGGGTGCTAGTTCTCAAGCTACTGGCGATCGTTTTAGATGGTTTTGTGTTGAGAGTGGAAGTGCTGATAATCCACCAGTGATACTGATCCATGGTTTTCCTTCACAGGCATATTCTTATCGCAAAGTTCTTCCAGTACTCTCCAAGGACTATCGTGCCATAGCCTTTGACTGGCTAGGATTCGGGTTTTCTGATAAGCCTCAACCCAGATATGGGTTTGACTACACACTAGATGAATATGTGTCATCATTGGAATCACTTATTGATGAACTGGCTGTTACTAAAGTCTCACTTGTTGTCCAGGGATATTTTTCGCCTGTTGTAGTTAAGTATGCCAGCAATCACCAGGACAAGCTCAGCAACTTAATACTCCTTAATCCACCTCTAACAGTTCAACATGCCAAGCTCCCGTCAACATTGTCCATATTCAGCAACTTTCTGCTTGGTGAAATATTTTCACAGGATCCATTAAGGGCCAGTGACAAAGCTCTAACAAGCTGTGGTCCCTATAAAATGAAAGAAGAAGATGCAATGGTCTATAGGCGTCCCTATCTTACATCCGGTTCCTCAGGCTTTGCACTAAATGCAATTAGCAGGAACATGTCGAAAGACCTCAAGAGATATGTGGAGGATATGCATAGAATACTTAAGGACAAAAATTGGAAAGTTCGGACCACAATATGTTGGGGTCAAAGAGACCGCTGGTTGAGCTATGATGGAGTGGAGGATTTCACCAAGGATTCCAACCATAAACTCATTGAAGTTCCTACGGCTGGTCATCATGTGCAGGAAGATTGTGGTGAAGAAATTGGACAACTTATTTGCGGGATAATAAGCAGAAGGACCAAGATATGA 1203 0.4273 MALQAFCGSACCFHSHLLHCSSTTASPKFLAARRFQSCPSTRKSLKLNCSSSGNNDDQDYLLDAPVSAGDGFSFSGGKYSDGPSPSDEWFKQGKMVKAYSIPGTGEKAKDPIFGLAMGASSQATGDRFRWFCVESGSADNPPVILIHGFPSQAYSYRKVLPVLSKDYRAIAFDWLGFGFSDKPQPRYGFDYTLDEYVSSLESLIDELAVTKVSLVVQGYFSPVVVKYASNHQDKLSNLILLNPPLTVQHAKLPSTLSIFSNFLLGEIFSQDPLRASDKALTSCGPYKMKEEDAMVYRRPYLTSGSSGFALNAISRNMSKDLKRYVEDMHRILKDKNWKVRTTICWGQRDRWLSYDGVEDFTKDSNHKLIEVPTAGHHVQEDCGEEIGQLICGIISRRTKI* 401
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu10g00906 400 Gene3D alpha/beta hydrolase 119 391 IPR029058 -
Lapu10g00906 400 PRINTS Alpha/beta hydrolase fold signature 228 241 IPR000073 -
Lapu10g00906 400 PRINTS Alpha/beta hydrolase fold signature 166 181 IPR000073 -
Lapu10g00906 400 PRINTS Alpha/beta hydrolase fold signature 341 355 IPR000073 -
Lapu10g00906 400 Pfam alpha/beta hydrolase fold 141 380 IPR000073 -
Lapu10g00906 400 PANTHER HYDROLASE-RELATED 122 396 - -
Lapu10g00906 400 SUPERFAMILY alpha/beta-Hydrolases 123 395 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu10g00906 Lapu-Chr10 10840962 10848312 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu10g00906 143 396 Miscellaneous Gene Families AT1G80280 24.176 4.53e-09 56.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu10g00906 - - var:108346208 773.467