Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu10g00901 CTGAAAGTTGAAGATGAGTCCTCTTTGATTTCAATCTCAAACGTGAACAGTCTCACAATTAATGGAAGTGGACAAATCAATGGCCACGGTTCTGCTTGGTGGAAATGCCCTTCTTGTCAAAGACCAAAGGTTATTAGTTTCGAACATTGCAATGGTCTTAGAGTTAGTTACCTGAGCATCATTGATAGTCCACGAGCTCATGTATCAATAGATGGTTGTAACAATGCTGTATTCTCTCATGTCAACATTCAAGCTCCTGCTGACAGCCCCAACACTGATGGGTTTGACATTTGCGCTTCAAAATATATCTCCATTCAAGATTCCACTATAGGAACTGGTGATGATTGTATTGCCATCAATGGTGGCTCCTCCTTCATCAATGCTACTAGAATTGCTTGTGGACCAGGCCATGGAATAAGTGTTGGCAGCCTGGGAAGAAACGGTGAGTATGATACAGTTGAAGAAGTTCATGTACGAAATTGCAGCTTCACAAAAACTCAAAACGGAGCAAGAATCAAGACATGGCAGGGAGGATCAGGTTATGCAAGAAAAATCACTTTTGAGAAAATCACATTGACACAGGCTTTCAACCCTATAATTATAAACCAGAAGTATCATCTTAATGGTTTCAAGGGAGGTGGTGAAAGTGAGTGA 654 0.4098 LKVEDESSLISISNVNSLTINGSGQINGHGSAWWKCPSCQRPKVISFEHCNGLRVSYLSIIDSPRAHVSIDGCNNAVFSHVNIQAPADSPNTDGFDICASKYISIQDSTIGTGDDCIAINGGSSFINATRIACGPGHGISVGSLGRNGEYDTVEEVHVRNCSFTKTQNGARIKTWQGGSGYARKITFEKITLTQAFNPIIINQKYHLNGFKGGGESE* 218
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu10g00901 217 Pfam Glycosyl hydrolases family 28 7 206 IPR000743 GO:0004650|GO:0005975
Lapu10g00901 217 PANTHER - 6 206 - -
Lapu10g00901 217 SUPERFAMILY Pectin lyase-like 8 207 IPR011050 -
Lapu10g00901 217 Gene3D - 2 217 IPR012334 -
Lapu10g00901 217 ProSitePatterns Polygalacturonase active site. 130 143 IPR000743 GO:0004650|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu10g00901 Lapu-Chr10 10815702 10817552 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu10g00901 7 213 Glycoside Hydrolase AT5G17200 55.556 1.62e-72 224
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu10g00901 K01184 - gmx:100782390 288.115