Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu10g00875 ATGGCTTATTCTTCTTGTTGTTCTTCTCGTTTGTTGTTGCAATTACAGAGTTCTTCGCGACTAATGTTACGTCTCTCACCCTTTCTCGCCACTCCTCCTTCTTCTTCTCTCTCTATCTCCTCTAACTGCCACGTGTCCTCTTCTGCTCAATCCACACTCCAACATGCACATCCACGAAGCTCAGAAATGGTGGCATTGGAATATGCTGACCTCAATCTCTCTTACAACTTGGATCTGGGTCACCTCAGGATCAGGCAACATGTTAATCCTCTGAGCTCTTCTTTCTCTGTTCCTGCACAAGTGCCAGACTGGAACCAGGTCTTTGCGGACCCAACATTGCCACTCATGGTGGACATTGGATGTGGCAGTGGCAGGTTTCTAATGTGGCTGGCTAAAAGAACTCCTAAAAAGAGAAATTTTTTGGGATTGGAGATACGGGAAAGGTTAGTCAAGCGTGCCGAGACATGGGCAATGGATCTGGCTCTCAATAACATACATTTCTTGTTTGCAAATGCCACTATTTCTTTCAAGCAGTTGATAGAATCATATCCTGGGCCCTTGGTCTTAGTTTCAATTCTGTGTCCAGACCCACATTTCAAGAAAAGACACCATAAAAGAAGAGTTCTGCAGAAGCCTTTGGTTGGTGCTATAGTGGACAATTTAATGCCAGGGGGACAGGTATTTGTACAGTCTGATGTGCCTCAAGTGGCACTTGACATGAGAAATCAGTTTGATGAAGTTGTAGTTCTGAAACACATTGATGTTTCAAACCCGGCTATGTTGTGTGACTGTGAAGGATGGTTGCTAAGAAACCCCATGGGAATAAGGACTGAGAGAGAGATTCATGCTGAACTTGAAGGTGCAAAAATCTTTAGAAGATTGTACGAGAAAGCGATATAA 900 0.4389 MAYSSCCSSRLLLQLQSSSRLMLRLSPFLATPPSSSLSISSNCHVSSSAQSTLQHAHPRSSEMVALEYADLNLSYNLDLGHLRIRQHVNPLSSSFSVPAQVPDWNQVFADPTLPLMVDIGCGSGRFLMWLAKRTPKKRNFLGLEIRERLVKRAETWAMDLALNNIHFLFANATISFKQLIESYPGPLVLVSILCPDPHFKKRHHKRRVLQKPLVGAIVDNLMPGGQVFVQSDVPQVALDMRNQFDEVVVLKHIDVSNPAMLCDCEGWLLRNPMGIRTEREIHAELEGAKIFRRLYEKAI* 300
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu10g00875 299 NCBIfam tRNA (guanosine(46)-N7)-methyltransferase TrmB 100 257 IPR003358 GO:0006400|GO:0008176
Lapu10g00875 299 ProSiteProfiles SAM-dependent methyltransferase TRMB-type domain profile. 73 297 IPR003358 GO:0006400|GO:0008176
Lapu10g00875 299 Pfam Putative methyltransferase 114 257 IPR003358 GO:0006400|GO:0008176
Lapu10g00875 299 PANTHER 3-DEOXY-D-MANNO-OCTULOSONIC-ACID TRANSFERASE/TRNA GUANINE-N 7 - -METHYLTRANSFERASE 59 297 IPR003358 GO:0006400|GO:0008176
Lapu10g00875 299 Gene3D Vaccinia Virus protein VP39 84 298 IPR029063 -
Lapu10g00875 299 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 113 247 IPR029063 -
Lapu10g00875 299 CDD AdoMet_MTases 117 230 - -
Lapu10g00875 299 FunFam tRNA (Guanine-N(7)-)-methyltransferase 83 299 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu10g00875 Lapu-Chr10 10603789 10608724 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu10g00875 K03439 - gmx:100788255 478.789
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu10g00875 10 10603789 10608724 Lapu10g00875 10 10603789 10608724 ECH