Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu10g00872 ATGGCTTCAAGGCCAGGAATCCTCACGGATTGGCCATGGAAACCTCTCGGAAGCTTTAAGTATGTGGTTCTAGCTCCATGGGTGGTTCACAGCACATATTCAGTGATGGTGAAGGATAAGGAAGAAAGGGACATGAGCACCTTTCTCATATTACCATTTTTGCTTTGGCGTATGCTTCATAACCAGATATGGATCACTCTCTCTCGTTACAGAACTGCCAAAGGAAAAGCTAGAATTGTGGATAAGGGACTTGAATTTGATCAAGTTGATAGAGAAAGAGAATGGGATGATCAAATACTGTTCAATGGATTACTGTACTACTTGGGATGCTACAAATTATCTGGTGCATCTCATCTTCCATTATGGAGAACTGATGGAGTAGTTATGGCAATGCTTCTTCATGCAGGACCAGTGGAGTTTCTTTATTACTGGTTACACAGAGCACTTCATCATCATTTTCTCTACTCTAGATACCATTCTCACCACCACTCTTCCATTGTCACAGAACCTATAACTTCTGTGATTCATCCATTTGCTGAACACATATCATATTTTCTTCTCTTTTCAATACCCATGTTAACCCTAGTATTCACAAACACAGCTTCTGTGGGGGCCATGGTAGGGTATGTCACTTACATTGACTTCATGAATAATATGGGTCACTCCAACTTTGAGGTGGTTCCAAAGTGGCTCTTTGCCATCTTCCCTCCTCTCAAATACCTCATCTACACCTCATCGTTTCATTCTTTGCACCATACCCAGTTTAGAACCAACTACTCCTTGTTCATGCCATTTTATGACTACATCTATGGCACCACAGATAAGGCTTCTGATACATTGCATGAATCAGCATTAAAAAGAGAAGAAGAAACACCAGATGTTGTGCATCTTACACATCTCACAACCCCTGAATCCATCTACCATCTCAGGCTTGGATTTGCTTACTTGGCTTCTAAGCCTTACACATCAAAATGGTACCTCAGTTTGATGTGGCCTATGACAGCTTGGTCTATGATCCTCACATGGATCTATGGTAGAACATTCATTGTGGAGGGGAATCGTTTTGACAAACTCAAGCTGCAAACTTGGGCAATTCCCAAGTACAGTCTCCAATACTTCTTGCAAGCACAAAAAGTGGCTATCAACACAATGATAGAAGATGCAATAATGGATGCAGACAGAAAAGGCATAAAGGTGTTGAGCTTAGGCCTAAGAAATCAAGGAGAGGACCTTAACATCTATGGAGGATTATATGTTAGCAGACATCCTAAGTTGAAAGTTAAGATTGTAGATGGAAGCAGTCTTGTAGTTGCTGTTGTTCTTAACAGCATTCCCAAAGGAACAACACAAGTGTTGCTTAAGGGAAAACTCACTAAGGTTGCTTATGCTCTTGCCTTTTCATTGTGTCAACAAAGAGTTCAGGTTGCTACATCGCATGAGGATGATTATGTGAGGCTCAAAAAGTCCTTCAAGAACTCTGAAACTAATTTGACCTTTTCCAAAAGCAACACACAGATGACGTGGTTAGTAGGAGATGAATTGACTAAAGAAGAACAACTAAAAGCCCCAAAAGGAACATTATTTATTCCTTACACACAATTTCCACCAAAGAAATATCGCAAAGATTGCTTCTACCATTACACCCCAGCAATGTTAGCTCCTTCTTCTGTTGAAAATATTCATTCTTGTGAGGATTGGTTGCCAAGAAGGGTGATGAGTGCATGGCGCATAGCTGGAATAGTGCACTCTCTTGAGGGATGGAATGAACATGAGTGTGGCCACACAATGAATAACATAGACAAAGTTTGGCATTCAACTCTTCAACATGGATTCCAACCTCTTTCTGGGCAAGTAAAAGAGTTAGCTCAATATTAA 1875 0.4064 MASRPGILTDWPWKPLGSFKYVVLAPWVVHSTYSVMVKDKEERDMSTFLILPFLLWRMLHNQIWITLSRYRTAKGKARIVDKGLEFDQVDREREWDDQILFNGLLYYLGCYKLSGASHLPLWRTDGVVMAMLLHAGPVEFLYYWLHRALHHHFLYSRYHSHHHSSIVTEPITSVIHPFAEHISYFLLFSIPMLTLVFTNTASVGAMVGYVTYIDFMNNMGHSNFEVVPKWLFAIFPPLKYLIYTSSFHSLHHTQFRTNYSLFMPFYDYIYGTTDKASDTLHESALKREEETPDVVHLTHLTTPESIYHLRLGFAYLASKPYTSKWYLSLMWPMTAWSMILTWIYGRTFIVEGNRFDKLKLQTWAIPKYSLQYFLQAQKVAINTMIEDAIMDADRKGIKVLSLGLRNQGEDLNIYGGLYVSRHPKLKVKIVDGSSLVVAVVLNSIPKGTTQVLLKGKLTKVAYALAFSLCQQRVQVATSHEDDYVRLKKSFKNSETNLTFSKSNTQMTWLVGDELTKEEQLKAPKGTLFIPYTQFPPKKYRKDCFYHYTPAMLAPSSVENIHSCEDWLPRRVMSAWRIAGIVHSLEGWNEHECGHTMNNIDKVWHSTLQHGFQPLSGQVKELAQY* 625
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu10g00872 624 Pfam Fatty acid hydroxylase 136 272 IPR006694 GO:0005506|GO:0008610|GO:0016491
Lapu10g00872 624 Pfam WAX2 C-terminal domain 451 613 IPR021940 -
Lapu10g00872 624 PANTHER STEROL DESATURASE 13 613 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu10g00872 Lapu-Chr10 10528831 10539885 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu10g00872 1 614 Lipid Metabolism Gene Families AT1G02190 58.494 0.0 737
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu10g00872 K15404 - gmx:100818020 1155.58
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu10g00872 10 10528831 10539885 Lapu10g00872 10 10528831 10539885 ECH