Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu10g00871 ATGGCATCCAAACCTGGCATACTCACCAATTGGCCATGGCAGCCTCTGGGGAGTTTCAAGTGGGTGATTTTGACTCCATGGATTTTACACAGCACTTACTCCTTCATAGTGAATGATCCAAAGAAGAAAGACCTTGGTTACTTCCTCATCTTTCCCTATATGTTGGTGAGGATGCTGCATGACCAAATTTGGATAACACTTTCTCGCCATAGAACTGCCAAAGGCAAAAACAGAATCGTTGACAAGGGCATTGAGTTTGAACAAGTTGATCGAGAAAGCAATTGGGATGATCAGATCTTGTTCAATGGGATATTGTTTTATGTAGGTCATATGTTAATTCCAGAGGCTTCTTTCATGCCCTTGTGGAGAATGGATGGTGTGGTTATCACTGCTCTTTTACATGCAGGAGCAGTGGAGTTTCTTTATTATTGGTTACACAGAGCACTTCATCATCATTTTCTCTACTCCAGATACCATTCTCACCACCATTCTTCCATTGTCACAGAACCCATTACTTCTGTGATCCATCCATTTGCCGAGCACATTGCATACTTTGTGTTATTTGCCATTCCATTGTACACCACTGTGGTCACAAGAACAGCTTCTATAGCTTCCTATGCTGGTTATCTTGCATACATTGACTTCATGAACAATTTGGGTCACTGCAATTTTGAGTGCATTCCTAAGGGCATCTTCTCAACTTTTCCCTTCCTCAAGTATCTCATGTACACACCATCGTTTCACTCATTGCATCATACCCAGTTTAGGACCAATTACTCACTCTTCATGCCAATTTATGATTACATTTATGGAACCATGGACAAGACTACAGACACAACATATGAGACATCACTGAAAAGAGAAGAAATCTCACCTGATGTGGTTCATCTAACACACCTTACAAACCCAGAATCAATTTATCATCTAAGGTTGGGATTTGCTTCCTTAGCCTCCAAACCTCAATCTTCAACATGGTACCTCTATTTGATGTGGCCATTCACTCTTTGGTCTGTTCTTGTGACTTGGTTTTATGGCCAAACATTTGTCATGGAGAGGAATGCTTTCAAAATGCTCAATTTACAATCATGGGTTATACCTAGATTCCATGTACAATACCTTTTCAAATGGCAAAGTGAAACACTGAACAAACTTATAGAAGAAGCAATACTTCAAGCAGACTCAAGCAAAGCAAAGGTTTTAAGTCTAGGTCTTTCAAACCAGGCAAATTCACTCAATAAAAATGGTGAACTTTACATCAAAAGGTTTCCTGAGCTTAAGATAAAGATTGTGGATGGTAGTAGCTTAGTTGTGGCTATTGTTCTTAATAGTATTCCTAAAGAAGCAAGTGAAGTGCTTCTTTGTGGCAAACCTAATAAGGTTTCATATGCCATTGCTAGTGCTTTATGTGAAAAGGGTACAAAGGTTACAACTATGTATAAAGATGAATATGATGATCTTCAATTAAGACTCTCCAACGAGTCCAAAAAGAACTTGGTTTTCCCAGGATCCTACACTGCAAAGATTTGGGTAGTGGGGGACCAATTTAACGAGGCAGAACAAAAGAAGGCACCAAAAGAATCACTGTTCATTCCTATTTCCCAATTCCCTCCAAAGAAACTTAGAAAAGACTGCTACTACCACAGCACACCAGCCATGATAGCTCCTTCTTCCTTAGTGAATGTGGACTCTTGTGAGAACTGGCTACCAAGAAGAGTGATGAGTGCATGGCGCGTGGCAGGAATACTGCATGCCCTAGAAGGTTGGAACGTTCATGAATGTGGAAATTTCACTTTTAGCATTGAGAAAATATGGCAAGCAAGTCTTCACCATGGCTTTAGGCCATTCAAGATTAACCCTCTTTCTTCAATTCTTAATTAA 1878 0.3994 MASKPGILTNWPWQPLGSFKWVILTPWILHSTYSFIVNDPKKKDLGYFLIFPYMLVRMLHDQIWITLSRHRTAKGKNRIVDKGIEFEQVDRESNWDDQILFNGILFYVGHMLIPEASFMPLWRMDGVVITALLHAGAVEFLYYWLHRALHHHFLYSRYHSHHHSSIVTEPITSVIHPFAEHIAYFVLFAIPLYTTVVTRTASIASYAGYLAYIDFMNNLGHCNFECIPKGIFSTFPFLKYLMYTPSFHSLHHTQFRTNYSLFMPIYDYIYGTMDKTTDTTYETSLKREEISPDVVHLTHLTNPESIYHLRLGFASLASKPQSSTWYLYLMWPFTLWSVLVTWFYGQTFVMERNAFKMLNLQSWVIPRFHVQYLFKWQSETLNKLIEEAILQADSSKAKVLSLGLSNQANSLNKNGELYIKRFPELKIKIVDGSSLVVAIVLNSIPKEASEVLLCGKPNKVSYAIASALCEKGTKVTTMYKDEYDDLQLRLSNESKKNLVFPGSYTAKIWVVGDQFNEAEQKKAPKESLFIPISQFPPKKLRKDCYYHSTPAMIAPSSLVNVDSCENWLPRRVMSAWRVAGILHALEGWNVHECGNFTFSIEKIWQASLHHGFRPFKINPLSSILN* 626
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu10g00871 625 PANTHER STEROL DESATURASE 19 614 - -
Lapu10g00871 625 Pfam WAX2 C-terminal domain 451 614 IPR021940 -
Lapu10g00871 625 Pfam Fatty acid hydroxylase 133 272 IPR006694 GO:0005506|GO:0008610|GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu10g00871 Lapu-Chr10 10509558 10520065 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu10g00871 1 620 Lipid Metabolism Gene Families AT1G02190 56.349 0.0 707
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu10g00871 K15404 - gmx:100790115 1140.18
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu10g00871 10 10509558 10520065 Lapu10g00871 10 10509558 10520065 ECH