Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu10g00852 ATGGCTACCTTTCCTTCTCCTCCTTCACCTCCTTCTTCAATTCCTTCTCCAAGATCTAGCATGTTTTACTATGCTAGAACTGAAGGCCACTATGAGGAACCTCACTTCCTCCAAGCTTGTTTTCTATGCAGAAAACCACTAGGCCAAAACCGTGACATCTTCATGTACAGAGGGAACACACCATTTTGTAGCAAAGAGTGCAGGCAGGAGCAAATAGAGATTGATGAGGCAAAGGAGAAAAGTTGGAAGCTTTCTTCCAAAAGGGGTGTGAGACAATCAGAGAACAATCAAAGTTCCACACCCAATAAGGCTGTGAGAACAGGCACAGTGGCAGTGGCCTAA 342 0.4503 MATFPSPPSPPSSIPSPRSSMFYYARTEGHYEEPHFLQACFLCRKPLGQNRDIFMYRGNTPFCSKECRQEQIEIDEAKEKSWKLSSKRGVRQSENNQSSTPNKAVRTGTVAVA* 114
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu10g00852 113 Pfam zinc-finger of the FCS-type, C2-C2 28 78 IPR007650 -
Lapu10g00852 113 MobiDBLite consensus disorder prediction 88 106 - -
Lapu10g00852 113 MobiDBLite consensus disorder prediction 80 113 - -
Lapu10g00852 113 ProSiteProfiles Zinc finger FLZ-type profile. 35 79 IPR007650 -
Lapu10g00852 113 PANTHER FCS-LIKE ZINC FINGER 1-RELATED 28 113 IPR044533 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu10g00852 Lapu-Chr10 10280004 10281547 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu10g00852 - - gmx:100499981 201.83
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu10g00852 10 10280004 10281547 Lapu10g00852 10 10280004 10281547 ECH