Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu10g00841 ATGCATCAAAAGAAATCCGAACTTCAGATCGGAAAAGAAAGCACCGGCGTCTCTTCCGATTTCAACCCTCTCCACCACCATCCCAACCACCCTCTCCCCAACCTAACTCCCAATCTCGACCTTCCAACCCTAACCCTAACCTCAACCGCCCCCTATAAAAGGCCCTCTCTCGCCAAATCCCCAACCCTCCACAGATTTCCCAGACCGCGCCGTGCCGCCGCTCCCTCCTCCACCACCTCCACGTGGCTATCCTACATCATCTTCCTCCGCCGGAGGCTACGGCACCGCCTACGCCTCTTCCTCTTTCTCTCCCTCCCATTCTTCTACTTCCTCGTCTCCCACCCTACAAACTCCTTCCTGCTTGATTTCCTCTCCGCGTTCTTCTTCTCTGCGGCGCTCTTCTTCTCGCTCAACCTCGCCTTGCCGCGGATTCCCTCTGTGCGTCTCTTCCTCCAGCCCAAGGCCCGGCCGGCGCTCAAGCTCCCCGTGTTCTGGGCCCGCCCCGCCCAGCCTGAGTTTCAATTCTCTGTGGTTGCGTACTCGAACGGTGACGTTTACGAGGGGGAGTTCAGGGGAGGGAAGTGTTGTGGGAGTGGGGTTTACTACTACAGCATGAGTGGGAGGTATGAGGGGGATTGGGTGGAGGGGAAGTACGATGGATTTGGCGTGGAGACGTGGGCGAGGGGGAGTAGGTACCGGGGGCAATACCGCCAGGGACTCCGGCACGGGTTCGGGGTGTATCGGTTTTACACCGGCGATGTTTATGCGGGGGAGTGGGCCAGTGGGCAGAGCCATGGCTGTGGGGTGCACACGTGCGAGGATGGGAGCAGGTACGTGGGGGAGTTCAAGTGGGGCGTTAAGCATGGCCTTGGACACTACCATTTTAGAAATGGGGATACATATGCTGGTGAATACTTTGCGGATAAGATGCATGGATATGGAGTATATAGTTTTGCAAATGGACATAGTTATGAAGGATCCTGGCATGAAGGCAAAAGGCAAGGTATTGGAATGTATACATTTAGAAATGGAGAAACCCAGTCTGGTCACTGGCAAAATGGAGTCATTGACATTCCCAGCACACAGAGTGCGACCTATCCTGTTTCTCCTGTTGGTGTCAATCATTCTAGAGTACTAAATGTAGTGCAGGAAGCAAGGAGAGCAGCTGAGAAGGCCTATGATGTGGCCAAGGTAGATGAAAGGGTTAATAGAGCAGTAGCAGCTGCTAACAGATCCGCCAATGCAGCTAGAGTAGCTTCTGTCAAGGCTGTGCAAAATCAAATGCATCATAATGTTAACAGCAAGAGCATCCCAATCCCCATTGTGTGA 1329 0.5395 MHQKKSELQIGKESTGVSSDFNPLHHHPNHPLPNLTPNLDLPTLTLTSTAPYKRPSLAKSPTLHRFPRPRRAAAPSSTTSTWLSYIIFLRRRLRHRLRLFLFLSLPFFYFLVSHPTNSFLLDFLSAFFFSAALFFSLNLALPRIPSVRLFLQPKARPALKLPVFWARPAQPEFQFSVVAYSNGDVYEGEFRGGKCCGSGVYYYSMSGRYEGDWVEGKYDGFGVETWARGSRYRGQYRQGLRHGFGVYRFYTGDVYAGEWASGQSHGCGVHTCEDGSRYVGEFKWGVKHGLGHYHFRNGDTYAGEYFADKMHGYGVYSFANGHSYEGSWHEGKRQGIGMYTFRNGETQSGHWQNGVIDIPSTQSATYPVSPVGVNHSRVLNVVQEARRAAEKAYDVAKVDERVNRAVAAANRSANAARVASVKAVQNQMHHNVNSKSIPIPIV* 443
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu10g00841 442 MobiDBLite consensus disorder prediction 1 37 - -
Lapu10g00841 442 Gene3D - 216 260 - -
Lapu10g00841 442 Gene3D - 174 215 - -
Lapu10g00841 442 Gene3D - 261 307 - -
Lapu10g00841 442 Gene3D - 308 371 - -
Lapu10g00841 442 MobiDBLite consensus disorder prediction 52 75 - -
Lapu10g00841 442 FunFam Phosphatidylinositol 4-phosphate 5-kinase 8 307 352 - -
Lapu10g00841 442 FunFam Phosphatidylinositol 4-phosphate 5-kinase 8 215 260 - -
Lapu10g00841 442 SMART morn 207 228 IPR003409 -
Lapu10g00841 442 SMART morn 184 205 IPR003409 -
Lapu10g00841 442 SMART morn 322 343 IPR003409 -
Lapu10g00841 442 SMART morn 276 297 IPR003409 -
Lapu10g00841 442 SMART morn 230 251 IPR003409 -
Lapu10g00841 442 SMART morn 253 274 IPR003409 -
Lapu10g00841 442 SMART morn 299 320 IPR003409 -
Lapu10g00841 442 SUPERFAMILY Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain 180 285 - -
Lapu10g00841 442 SUPERFAMILY Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain 273 357 - -
Lapu10g00841 442 PANTHER PHOSPHATIDYLINOSITOL-4-PHOSPHATE 5-KINASE RELATED 176 397 - -
Lapu10g00841 442 Pfam MORN repeat 209 231 IPR003409 -
Lapu10g00841 442 Pfam MORN repeat 232 254 IPR003409 -
Lapu10g00841 442 Pfam MORN repeat 186 206 IPR003409 -
Lapu10g00841 442 Pfam MORN repeat 324 345 IPR003409 -
Lapu10g00841 442 Pfam MORN repeat 255 277 IPR003409 -
Lapu10g00841 442 Pfam MORN repeat 301 322 IPR003409 -
Lapu10g00841 442 Pfam MORN repeat 278 300 IPR003409 -
Lapu10g00841 442 FunFam Phosphatidylinositol 4-phosphate 5-kinase 8 261 306 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu10g00841 Lapu-Chr10 10196418 10203475 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu10g00841 179 357 Acyl Lipid Metabolism Gene Families AT1G60890 38.547 1.98e-31 125
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu10g00841 - - gmx:100784010 634.795