Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu10g00808 ATGGGGAGCGAAGAGGAAGAAGAAGAAGAATTGGTGGCTGAAGTTGAAGCAGTGGAAGCCGTGTATGGAACCGATTGCGTTGTTCTCAGTTCATTTCCTCCCCATTTTCACCTCTTTCTCAAACCCAGAACTGCTGATGTTTCCTCCCAACAGTTTGTAGAAGCTGTTCTGGATATACGAGCCAGCTCACAGTATCCAAAAGAACCACCTTCTATTGAGCTTGTGGATTGCAAGGGTCTGGATGAACAGAGGCAGAAACATTTATTAAATTACATACAAAGTAAAGCCTATGAGATCTCCCCTTGTTTAATGCTTGTAGCTCTTTGTGAGGAAGCTGTTGAGAAACTTTCAGCTATGAATCATCCTGATGGTGATTGTCCATTGTGTTTATTCCCTTTGGTCCCAGAAGATCAGCAAAGTGAAACCTTGCCTTTTATGAAGTTAATGTCTTGTTTTCATTGCTTTCACAGTGAATGTATCATCAGATGGTGGAAATGGCTTCAAAATTCTAAAGAATCAGACTCTGCCAACATAGACAGTGCAGCTGCACATCGCAACCAAGATAATCATAAGAAAATGGAAGAGAGTGTCGGAAACTGCCCAGTCTGTCGCAAACCTTTTCTTGCCAAGGATTTGGACCATGTGCTTGCGCTAGTTGGTTCATATTCTTCCCAATTGAGTTCAGACAATGAAGAAGTCAATGATGAGGAAACGCTCCTTCAATCAGAGGATGAGATAATTAGGAGACAGAAATTTGAAGCCATCCTAAATTTACAGAAGGAGAACAGTGGCTTGATTGAACCCAAAAAGGATATAGTCATATTACCTGGTATGTATCTTCCACAACCAGTTCCAATGCCGAGCTCCACATCAACCAAGGAATCTGATGAGCAGACACAAAAAGAACCACCTACAGTTGTGTCAGGAAAACATGTCGGTGGGACGTCCAATGGACCTAGTTCTAGCAGGCAGAGGAATTCCGGTGCAAGGAGGCAAAAGGCAAGAAGTGATAACCACACTAGTTCAACTGTAAGAAAGCCTGGAAAACCAGTTCAACAGTGGGTAAGAAGAGATACTCCTAGCAATAAGCAATAG 1095 0.4256 MGSEEEEEEELVAEVEAVEAVYGTDCVVLSSFPPHFHLFLKPRTADVSSQQFVEAVLDIRASSQYPKEPPSIELVDCKGLDEQRQKHLLNYIQSKAYEISPCLMLVALCEEAVEKLSAMNHPDGDCPLCLFPLVPEDQQSETLPFMKLMSCFHCFHSECIIRWWKWLQNSKESDSANIDSAAAHRNQDNHKKMEESVGNCPVCRKPFLAKDLDHVLALVGSYSSQLSSDNEEVNDEETLLQSEDEIIRRQKFEAILNLQKENSGLIEPKKDIVILPGMYLPQPVPMPSSTSTKESDEQTQKEPPTVVSGKHVGGTSNGPSSSRQRNSGARRQKARSDNHTSSTVRKPGKPVQQWVRRDTPSNKQ* 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu10g00808 364 Gene3D Ubiquitin Conjugating Enzyme 2 121 IPR016135 -
Lapu10g00808 364 ProSiteProfiles Zinc finger RING-type profile. 126 204 IPR001841 -
Lapu10g00808 364 Coils Coil 1 21 - -
Lapu10g00808 364 MobiDBLite consensus disorder prediction 283 364 - -
Lapu10g00808 364 Pfam RWD domain 10 115 IPR006575 GO:0005515
Lapu10g00808 364 SMART ring_2 126 203 IPR001841 -
Lapu10g00808 364 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 122 218 IPR013083 -
Lapu10g00808 364 PANTHER RING FINGER PROTEIN 25 5 349 IPR039133 GO:0061630
Lapu10g00808 364 SUPERFAMILY RING/U-box 118 210 - -
Lapu10g00808 364 SMART RWD2001b 13 119 IPR006575 GO:0005515
Lapu10g00808 364 SUPERFAMILY UBC-like 7 116 IPR016135 -
Lapu10g00808 364 MobiDBLite consensus disorder prediction 301 327 - -
Lapu10g00808 364 FunFam RWD domain-containing protein 122 219 - -
Lapu10g00808 364 ProSiteProfiles RWD domain profile. 13 119 IPR006575 GO:0005515
Lapu10g00808 364 FunFam eIF-2-alpha kinase GCN2 1 125 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu10g00808 K10640 - gmx:100791789 618.616
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu10g00808 10 9849135 9858805 Lapu10g00808 10 9849135 9858805 ECH