Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu10g00804 ATGGCTTCCACGGTTGTTGCCGCCGCCCCGAGGAGCGAACCACCGTCGCGGTCGGTGGATCCTTCGCCATCCTCCTCCCCCGACGTCGGTGATCGGAGCGATTCGTTCAATTCCTCGCAGAACCACTTATCCGATAATGAAGTTCAGTTCCAGACTCCGGACGTATTGAAGAGTGAAGAGTATCGTCAATTGTTCCATCTTCCACCTGAGGAAGTCCTTATTGAAGATTTTAATTGTGCCCTCCAGGAAAACTTACTTATTCAGGGTCATATGTATCTCTTTGTCAACTTCATTTGTTTCTACTCAAACATATTTGGATATGAGACAAAGAAAGTAATCCCATTCCCTGAAGTCACTTGTGTAAGGAGGGCAAAAACAGCTGGGATATTTCCCAATGCCATTGAAATTCAAGCGGGAAACAGGAAGCACTTCTTTGCATCCTTCCTATCCCGTGATGAAGCTTTTAAGATTATTAATGATGGATGGTCACGACAGGGTAGTGGAGCCATAACAATCATGGAACAGAAGGAGTCAATATCTGAGTCCAGCAGCCAAGAGAATGGATTTGTAGCTGCTGAAAATGTCAAAAGTTCTAATATACCTGACAACGCATCACTCTCTACTGATCTGAGCAAAGATACAGGGCTTCAATCCATTGTAGGAGATGTGCCTGTATTAGTGGCGGATTCAGAGAAGCAATGCAGTGTACAACAAGTTGCTGAACTTGAATTGAATAATGATGCCCCAAGTGAGAGTTGGAAGTGGAACGAGGAGGATATTTATGCCCCATCAATCGATGAAGCATTTACATGCGTTGCAGAAGCAGTGTTTCCGATAAAGGTTGAAGACTTCTTTAGGTACTTTTTCTCAGATGATGCTGTAAATTTTCTTGAGTCTTTTCACAAAAAATGTGGTGATAAAGACTTTAAGTGTGGTTCGTGGCATCCTCAGGAGAAATTTGGGTATGCTCGTGAGCTGTCATTTCAACATCCAATAAAAATTTATCTTGGAGCAAAATTTGGTGGCTGCCATGAGGTCCAGAAATTTCGTGTTTATAAGAACAGTCATCTGGTTATAGAGACATCGCAAGAAGTCAGTGATGTACCTTATGCAGATTATTTCCGAGTTGAGGGGCTGTGGAATGTAGAGAGAGACAAGGATGAATCAAAAGAATGCTGCATCATGCGCGTATATGTGAATGTGGCATTTTCTAAAAGAACTATTTGGAAAGGAAAAATAGTACAATCAACAATTGAAGAATGTCGAGATGCTTATGCGGCGTGGATGAACATGGCACATGAAATGTTGAAGCAGAAGAACCTTGAAAAACAAGGTGAAAACAGTGAAATGAATTTAGATAGAGAAGTGAAGACTGGAGAATCTTCTGAAGGCTCACAGGAGCAAAGTAGCCTTACAAAGATACTACCTACATCCAATGCCTTGGATGCTACTACTACTACCCACAATACTGGCTCTCACTTGCAGGGAAGTTTCACTGAACCATCATCTGTTCCATTGTTCGTACAGTTTATGACAAAGTTCAGATCATCCTTGAAGAGTCATAGCAATCTTTCTCTGCTCCTTCTTACTACTATCGCTCTGATTTTCTTCATTCAGCAGTTTAGCATACTCGTGCTATTGGCAAGACCTCAGCACATACATATGAACACTCCTGTAGACTTAATGAACAATGACATGAGTAGAACTCCTTCAGACATAGCTTGGATGGAGAAAAGAATTCATCACCTTAAAGATGAGATGTACATGGTTGAAAGTAGGCTTGAAAGGATGCGGTATGAACATTCACTTTTAAAAAAACAACTAAAGGACCTAGAACAACACAAGTAG 1848 0.415 MASTVVAAAPRSEPPSRSVDPSPSSSPDVGDRSDSFNSSQNHLSDNEVQFQTPDVLKSEEYRQLFHLPPEEVLIEDFNCALQENLLIQGHMYLFVNFICFYSNIFGYETKKVIPFPEVTCVRRAKTAGIFPNAIEIQAGNRKHFFASFLSRDEAFKIINDGWSRQGSGAITIMEQKESISESSSQENGFVAAENVKSSNIPDNASLSTDLSKDTGLQSIVGDVPVLVADSEKQCSVQQVAELELNNDAPSESWKWNEEDIYAPSIDEAFTCVAEAVFPIKVEDFFRYFFSDDAVNFLESFHKKCGDKDFKCGSWHPQEKFGYARELSFQHPIKIYLGAKFGGCHEVQKFRVYKNSHLVIETSQEVSDVPYADYFRVEGLWNVERDKDESKECCIMRVYVNVAFSKRTIWKGKIVQSTIEECRDAYAAWMNMAHEMLKQKNLEKQGENSEMNLDREVKTGESSEGSQEQSSLTKILPTSNALDATTTTHNTGSHLQGSFTEPSSVPLFVQFMTKFRSSLKSHSNLSLLLLTTIALIFFIQQFSILVLLARPQHIHMNTPVDLMNNDMSRTPSDIAWMEKRIHHLKDEMYMVESRLERMRYEHSLLKKQLKDLEQHK* 616
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu10g00804 615 FunFam GRAM domain containing 1B 57 165 - -
Lapu10g00804 615 PANTHER PROTEIN VASCULAR ASSOCIATED DEATH 1, CHLOROPLASTIC 18 613 - -
Lapu10g00804 615 MobiDBLite consensus disorder prediction 22 48 - -
Lapu10g00804 615 Pfam GRAM domain 61 163 IPR004182 -
Lapu10g00804 615 SMART gram2001c 59 125 IPR004182 -
Lapu10g00804 615 CDD PH-GRAM_GRAMDC 69 162 - -
Lapu10g00804 615 MobiDBLite consensus disorder prediction 462 477 - -
Lapu10g00804 615 MobiDBLite consensus disorder prediction 442 477 - -
Lapu10g00804 615 Pfam VAD1 Analog of StAR-related lipid transfer domain 272 420 IPR031968 -
Lapu10g00804 615 Coils Coil 594 614 - -
Lapu10g00804 615 MobiDBLite consensus disorder prediction 1 48 - -
Lapu10g00804 615 ProSiteProfiles VASt domain profile. 268 440 IPR031968 -
Lapu10g00804 615 Gene3D - 57 165 IPR011993 -
Lapu10g00804 615 MobiDBLite consensus disorder prediction 442 461 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu10g00804 - - gmx:100805910 975.696
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu10g00804 10 9813209 9825171 Lapu10g00804 10 9813209 9825171 ECH