Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu10g00769 ATGCAGAGGAAAAGGGTAGGGTGGTGGTTCTTCACAAAGGCAAAGTTTAGCCTTAATACATACCGAAACGTCTCTTCTTCTCAACACGTAATTCTTGACAACCCCAATCACAGTCAGGTTTTGGTCGAAGGAAATGGATGCTCCAGAATGGCCATTCTCAATAGACCCTCTGCTCTCAATGCTCTCAACACCAACATGGCGGCTACACTGCATAAACTTTATAGGAGTTGGGAAGATAACCCTGATATTGGTTTTGTGAAGATGAAGGGCAGTGGCCGAGCGTTTGCAGCTGGTGGAGATATTGTTGCGCTTTACCATTTGATAAACAAAGGAAACATGGAAGCGTGTAAAGAATTTTTCAGAACAGCTTATAGTTTTATGTACCTGATAGGTACATATTTGAAGCCACATGTGGCACTTCTAAATGGCATTACCATGGGTGGTGGGGCCGGAATTTCAATCCCTGGAACATTCCGTGTTGCAACAGACAAAACTATTTTTGCTACCCCTGAAGTTCATATTGGATTCCACCCTGATGCTGCAGCATCTTTTTACCTTTCACATTTGCCTGGTCATTTAGGAGAGTACTTGGCTCTGACAGGGGAAAAGCTCAACGGAGTAGAGATGGTTACCTGTGGGCTTGCTACACACTATTCATTAAGTGCAAGGCTTCCTTTAATTGAAGAACAGCTGGGAAAATTGGTTACGGATGACCCATCTGTCATTGAAGCCACTTTAGAACATTATGGGGACCTTGTACATCCAGACAGCAGTAGCGTACTGCAAAGGATTGAAATTCTAGATAAATGCTTTTGCCATGACACAGTTGAAGAGATTGTTGATGCTATGAAAAATGCAGCAAGTGAAACAAAAGATGCATGGTGCATTTCTACCCTAAACAGACTCAAAGAAGCCTCTCCATTGAGCTTGAAGGTTGCCTTGAGATCTATACGGGAAGGTAGATTTCAGACGCTTGATCAATGCTTGTTGCGTGAGTACCGTATGACTTTACAAGCAATACATAGACAAATATCTGGGGATTTCTGTGAGGGAGTAAGGGCACGCGTGGTGGACAAGGACTTTGCTCCAAAGTGGGATCCTCCAACCTTAGAAAAGGTGTCTCAAGATATGGTGGATCAGTACTTCTTACCTCTCAGTGAATCTGAACCTGATCTAGAGCTCCCTACAAAAAGTCGTGAAGCATTTCTATAG 1212 0.4332 MQRKRVGWWFFTKAKFSLNTYRNVSSSQHVILDNPNHSQVLVEGNGCSRMAILNRPSALNALNTNMAATLHKLYRSWEDNPDIGFVKMKGSGRAFAAGGDIVALYHLINKGNMEACKEFFRTAYSFMYLIGTYLKPHVALLNGITMGGGAGISIPGTFRVATDKTIFATPEVHIGFHPDAAASFYLSHLPGHLGEYLALTGEKLNGVEMVTCGLATHYSLSARLPLIEEQLGKLVTDDPSVIEATLEHYGDLVHPDSSSVLQRIEILDKCFCHDTVEEIVDAMKNAASETKDAWCISTLNRLKEASPLSLKVALRSIREGRFQTLDQCLLREYRMTLQAIHRQISGDFCEGVRARVVDKDFAPKWDPPTLEKVSQDMVDQYFLPLSESEPDLELPTKSREAFL* 404
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu10g00769 403 PANTHER 3-HYDROXYISOBUTYRYL-COA HYDROLASE-RELATED 36 398 IPR032259 GO:0003860
Lapu10g00769 403 FunFam Probable 3-hydroxyisobutyryl-CoA hydrolase 2 34 398 - -
Lapu10g00769 403 Gene3D - 34 398 - -
Lapu10g00769 403 CDD crotonase-like 40 217 - -
Lapu10g00769 403 SUPERFAMILY ClpP/crotonase 38 368 IPR029045 -
Lapu10g00769 403 Pfam Enoyl-CoA hydratase/isomerase 49 382 IPR045004 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu10g00769 Lapu-Chr10 9537048 9546515 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu10g00769 35 403 Acyl Lipid Metabolism Gene Families AT4G31810 63.947 0.0 517
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu10g00769 K05605 - gmx:100801676 728.783
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu10g00769 10 9537048 9546515 Lapu10g00769 10 9537048 9546515 ECH