Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu10g00729 ATGGCTTCCACCGAGGGTCTGGTGCCCATAACTAGGGCCTTTCTCGCCTCTTATTACGACAAACACCCTTTCACTCCTCTTTCCGCTGATGTCACCCGACTTTCTTCTCAGATTCGTTCAATGGCTAATGATTTCCTCACTCAACATCCTCCCACCCAAGGAGAAAGCGTCTTAATAAATGAAGCTGACCGGCTACCTCCGCATAAAATTGATGAGAACATGTGGAAGAACCGAGAGTATATTGAAGAGACAATTTTTTTACTTCAAACTTCTAATTGGCCAGAACTGCTGAAGCAGCAGTCCTCACCTGACAGTGTTGAGTTTGCCCCTACATTTGGGCAGCTGAAAGATAAACTTCATAATACATTGAAGGCTTTAGAATCTTTCCAAATTAAAAATTCTGAACATGTATTTAACACAGTTATGACATATTTGCCTCAAGATTTTCGAGGAACATTACTTAGACAACAACGGGAGCGCTCTGAGAGGAATAAGCAAGCAGAGGTTGATACTTTGGTAAATTCTGGTGGTAGCATACATGACCGATATGCTTTAATGTGGAAACAACAAATGGACAGGAGAAGGCAATTAGCCCAGCTTGGCTCTGCAACAGGAGTCTATAAAACACTTGTGAAGTACCTTGTTGGTGTACCTCAGGTATTACTTGATTTTACTCGCCAGATAAATGATGACGATGGGCCCATGGAGGAACAACGTCAGCGCTATGGACCACCTTTGTACAGCCTCACCTCTATGATTCTTTATGTTCGACTCTTCCTTTCTATATCATGGGCACGATATGATACTAAGAAGTTAGATAGAGAACAAATTGCTATCTTGGAACAAGCTGTTGATGTCTACACCACAGAGTTGGAAAGGTTTTTGACATTTATCTGTGAGGTCTTTGCACATGCGCCTTTCTTCATTTCAGCAGAGGTTGTTGGTTCATTGGAAGCAAGGAAAAATGATGACTACAAAGAGATCAATATTCCAGCTGGGAAAACTTATGAGGTTTTGCTATCTGTTGATGTTGTAAACTCATACATTGCATGGGACTTTTCATTGGCACAAGGAAAAATAAATATGGATATTGGATTTAGTTTGGAGTTTATAAGTCCTACTGGGGAAAAAACACTGATGTTGCCGTCACGTCGTTATGAGTCTGACCAAGGAAACTTCTGCACGCTAATGGCTGGAAGCTATAAACTGATTTGGGACAACACGTATTCAACCTTTTTCAAAAAGGTTATACGGTACAAGATAGATTGTATACCTCCTGTGACAGAGCCAGTGCTGTCCGACTGA 1305 0.4138 MASTEGLVPITRAFLASYYDKHPFTPLSADVTRLSSQIRSMANDFLTQHPPTQGESVLINEADRLPPHKIDENMWKNREYIEETIFLLQTSNWPELLKQQSSPDSVEFAPTFGQLKDKLHNTLKALESFQIKNSEHVFNTVMTYLPQDFRGTLLRQQRERSERNKQAEVDTLVNSGGSIHDRYALMWKQQMDRRRQLAQLGSATGVYKTLVKYLVGVPQVLLDFTRQINDDDGPMEEQRQRYGPPLYSLTSMILYVRLFLSISWARYDTKKLDREQIAILEQAVDVYTTELERFLTFICEVFAHAPFFISAEVVGSLEARKNDDYKEINIPAGKTYEVLLSVDVVNSYIAWDFSLAQGKINMDIGFSLEFISPTGEKTLMLPSRRYESDQGNFCTLMAGSYKLIWDNTYSTFFKKVIRYKIDCIPPVTEPVLSD* 435
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu10g00729 434 Gene3D GOLD domain 299 423 - -
Lapu10g00729 434 ProSiteProfiles GOLD domain profile. 321 423 IPR009038 -
Lapu10g00729 434 SUPERFAMILY Supernatant protein factor (SPF), C-terminal domain 323 427 IPR036598 -
Lapu10g00729 434 PANTHER RETINAL-BINDING PROTEIN 1 431 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu10g00729 Lapu-Chr10 9217543 9227402 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu10g00729 - - vra:106774171 806.979