Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu10g00728 ATGCATCAAGAAGGCAAAAGTGGCGCTGATGACAACGTCATAAGAATAACGGGCTTGGTGGCTGTTACATGGACAAATTATCTAAGAAAGCGTCTTCCACTAACAATAAGGTCTCTTCATACCTTCAAAGGTAATCAATTAGACCAAATTTTAATGTCTCCACCTCTTGCATCTTTGGACCTTCTTGACATCTCGAGTCTCAATTCTTCATCTCGGATTGTTCCAGCAATATGTAAGGGCTTTCGGGCCATGGTTGCAAAAGCAACCTGCTTATGTTCGACTACTCTTTTCTGTTACAGAGACAATTGTCAAGACGAGGAAAAGGTTCTGGATGCTTTATGTCTTGAGAAAGATGTGGATGGTTTTCATCTCGTTAATATGGGGAATCTTGCCATAAGTGGAAGGGAGCCACTGTTTACTCCTTGTACTCCAAAGGGCTGCATTGAGTTATTAATCAGATCAGGACTCGAGATTATGGGGAAGAAAGTCGTAGTGATTGGAAGAAGTAATATAGTTGGTTTGCCAACGTCCTTGTTATTGCAGAGACACCATGCAACAGTCACTGTTATACATGCCTTCACAGAAAACCCTGAACAAATCACCTCAGAAGCTGATATCACAGTTTCAGCTGCTGGAGTGCCTAATTTGGTCCGTGGTAACTGGATAAAACCAGGTGCAACTGTGATCGATGTTGGTACTACTCCTGTTGAGATCCTGGCTGCGACGATGGTTATCGTCTCGTAG 744 0.4288 MHQEGKSGADDNVIRITGLVAVTWTNYLRKRLPLTIRSLHTFKGNQLDQILMSPPLASLDLLDISSLNSSSRIVPAICKGFRAMVAKATCLCSTTLFCYRDNCQDEEKVLDALCLEKDVDGFHLVNMGNLAISGREPLFTPCTPKGCIELLIRSGLEIMGKKVVVIGRSNIVGLPTSLLLQRHHATVTVIHAFTENPEQITSEADITVSAAGVPNLVRGNWIKPGATVIDVGTTPVEILAATMVIVS* 248
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu10g00728 247 CDD NAD_bind_m-THF_DH_Cyclohyd 116 237 IPR020631 GO:0004488
Lapu10g00728 247 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 122 236 IPR036291 -
Lapu10g00728 247 PRINTS Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 156 176 IPR000672 GO:0004488
Lapu10g00728 247 PRINTS Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 109 130 IPR000672 GO:0004488
Lapu10g00728 247 PRINTS Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 205 234 IPR000672 GO:0004488
Lapu10g00728 247 Gene3D - 126 243 - -
Lapu10g00728 247 FunFam Bifunctional protein FolD 139 244 - -
Lapu10g00728 247 Pfam Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain 123 236 IPR020631 GO:0004488
Lapu10g00728 247 PANTHER C-1-TETRAHYDROFOLATE SYNTHASE, CYTOPLASMIC-RELATED 104 236 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu10g00728 Lapu-Chr10 9211191 9216951 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu10g00728 - - gmx:100791604 249.21