Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu10g00710 ATGTCTCTCAGAAGCAGCGGTTTGTTTTGGTTTCGAATAAATTGTTCCGATTCAAAGCAAGGTGGCCGTGGTTTCGGAGAAAACTCTAACAGGATTAAGACCAACAAATCTGACAAGGGTTTCGTGTCGCAACCGAGTGGGAAGGGATCAACACCTAAACAGTCGCGCCCTCTATCTTCTCAGGCACCCCGTTTAAGTTCACAACTTGACAGCAAATCTAGGAAAGAATTTTTGGATGTTGACTTCGAGGAACGCCTAAAAACAGTCAGAAGGTCAGCACTTGAGCAGAAGAAGGCAGAGGAGCAAAAGGAATTTGGAGCAATTGACTATGATGCACCAATTTCTTCCGACGATAAGACAATTGGCCTTCCTACTAAGATTGGAGTAGGGGTAGCTGTTGTAGTCTTCGGTCTGGTTTTTGCTTTCGGAGATTTTCTTCCATCAGGAAGTGTTAGTCCTACTGATGACAGTGCTGTGGTCAGTAGTACATTATCAGAGGAGGAAAAAGCTACTCTCCAGAGTAGGCTCAAGGAATTTGAAGCAACATTAAGTATTTCCCCAAGAGATCCAACTGCTCTTGAAGGAGCTGCAGTAACTTTGACTGAACTAGGGGAATATGCAAGAGCTGCTTCTCTACTTGATGATTTGACAAAGGTAAAACCAAGTGATGCTGATGTTTTTCGTTTACTTGGAGAAGTTAAGTATGGACTCAAAGATTATGAAGGGAGTGTTGCTGCTTACAAAAGTTCTGCAAGGGTGTCCAAAGATATCCAATTTGAAGTTCTCCGTGGCCTTACCAATTCATTACTTGCTGCCAAAAAGCCAGAGGAGGCTGTTCAATTACTTTTGACTTATCGTGAGGATTTGAGCAAAAATTCTAATAGCTACCCATCAGACTCACAGAAGCTGGATCCTGTCCAAGTTGACTTACTTCTAGGGAAAGCTTACTCAGATTGGGGCCATGTCAGTGATGCTGTAGCAGTTTATGATCAACTCATATCTACTTACCCTAATGATTTTCGTGGATATTTAGCTAAGGGAATCATCCTAAAAGAAAACAAAAATATTGGTGATGCTGAAAGAATGTTCATACAAGCTAGGTTCTTTGCACCAGATAAAGCCAAAGCACTTGTGGACCGTTATTCTAGATGA 1152 0.4201 MSLRSSGLFWFRINCSDSKQGGRGFGENSNRIKTNKSDKGFVSQPSGKGSTPKQSRPLSSQAPRLSSQLDSKSRKEFLDVDFEERLKTVRRSALEQKKAEEQKEFGAIDYDAPISSDDKTIGLPTKIGVGVAVVVFGLVFAFGDFLPSGSVSPTDDSAVVSSTLSEEEKATLQSRLKEFEATLSISPRDPTALEGAAVTLTELGEYARAASLLDDLTKVKPSDADVFRLLGEVKYGLKDYEGSVAAYKSSARVSKDIQFEVLRGLTNSLLAAKKPEEAVQLLLTYREDLSKNSNSYPSDSQKLDPVQVDLLLGKAYSDWGHVSDAVAVYDQLISTYPNDFRGYLAKGIILKENKNIGDAERMFIQARFFAPDKAKALVDRYSR* 384
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu10g00710 383 MobiDBLite consensus disorder prediction 21 68 - -
Lapu10g00710 383 SUPERFAMILY TPR-like 176 376 IPR011990 GO:0005515
Lapu10g00710 383 SMART tpr_5 340 373 IPR019734 GO:0005515
Lapu10g00710 383 SMART tpr_5 224 257 IPR019734 GO:0005515
Lapu10g00710 383 SMART tpr_5 190 223 IPR019734 GO:0005515
Lapu10g00710 383 SMART tpr_5 306 339 IPR019734 GO:0005515
Lapu10g00710 383 Pfam Tetratricopeptide repeat 202 251 - -
Lapu10g00710 383 MobiDBLite consensus disorder prediction 20 72 - -
Lapu10g00710 383 ProSiteProfiles TPR repeat profile. 306 339 IPR019734 GO:0005515
Lapu10g00710 383 Gene3D Tetratricopeptide repeat domain 152 381 IPR011990 GO:0005515
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu10g00710 192 366 EF-hand Containing Proteins AT2G32450 25.424 1.08e-06 48.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu10g00710 - - pvu:PHAVU_010G164800g 659.448
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu10g00710 10 8985925 8994462 Lapu10g00710 10 8985925 8994462 ECH