Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu10g00689 ATGGCTCATATCTCATTCTCCTTGTCTGAAAAGCACTCTTCTTGTTCGTTGACCAACATAAACAACTTACCTGATGATGTGTTGAGAGAAATATTGGTTCTAATGCCATTTAGATCCATTGCGAAATCAAAGTGTGTGTGCAAACGTTGGTTGAGAATGATCTCAAGTCCTTCTTTCCCAACAGAATTTGTGTCCCGCCAGCACTCTCTCTTCAGCACCTACTTGACCTTCATTTCGCCCCACCAACTCATGCTCGGTTTCTTCCCAAAAGATTTCGACTTGAATGTCCAAACCCACAAGGCTCCTTTATCTCCAGACACCGTCATAAGGGGGAGCTTGTGTGGCTATTCGAACGGCTTGTTTCTGTGCTGCAGTAACAGATACACAAGTGGTCGTGGCTACTTTGTGTATGATCCACTCACCAAGCAATGCACCCACATACCTTCTTTTCCTGATGCAGACGAGGGAAACCGGTTATACGCTGTTGGCTTCCTTTCTCACACTAATTACCCCAAAGAAGGCCAAGAAGAAGGGCATTCTAGTCGCTGCTTCTGGGTGGTGGTTGTAAGAACCTTTATAAAAAGAAAGTACCAGTTTGAAGTGGAGGGTTTCTCCTCCGAGACAGGAAAATGGAGGCAAACATATGCGAGTTGCGCGGAGGGCTTTGCTTTTGCTCCTCACTGGATGCTCAGTTTTGCGTTTGGAGGGTACCTGTATTTCATGGGGAGTACAAGTATTTTTGTGTTTGATCCTAATTTTTTGTTTTCTAGTACTATTGATTACCCTCGAGATGCTGATGCTATGAATATAATAAGCTTCGGATACCTTGGATGCTCTGGTGGAACTCTGAGGATCGCTGATATTAGCAATAATGATCTGAGAGTGTGGGCACTAGTGTATCCTCAGGCATGGCATTTGGTGCACAGGACCAATCTGACGGAACATCTTCCCACCAGATTTTGCAGTAATTATTATAAGCATGTAGCGGGTTTCCATCCCTATGATGCAGACACTGTGTATCTGTACTCCTATGTTGATGGGATTTTTGTTGCAAACCTACGTACAAACAACTTTATGCCAATCTCTGGTTATGACAAATCAGATATCAGTCCCTTTCAATTAGAGCTCTCTCCAATTCGATATGCAGAAAACCATCGTAGGAAGGCAGAGGAAAACACAAGATCCAACTGA 1191 0.4383 MAHISFSLSEKHSSCSLTNINNLPDDVLREILVLMPFRSIAKSKCVCKRWLRMISSPSFPTEFVSRQHSLFSTYLTFISPHQLMLGFFPKDFDLNVQTHKAPLSPDTVIRGSLCGYSNGLFLCCSNRYTSGRGYFVYDPLTKQCTHIPSFPDADEGNRLYAVGFLSHTNYPKEGQEEGHSSRCFWVVVVRTFIKRKYQFEVEGFSSETGKWRQTYASCAEGFAFAPHWMLSFAFGGYLYFMGSTSIFVFDPNFLFSSTIDYPRDADAMNIISFGYLGCSGGTLRIADISNNDLRVWALVYPQAWHLVHRTNLTEHLPTRFCSNYYKHVAGFHPYDADTVYLYSYVDGIFVANLRTNNFMPISGYDKSDISPFQLELSPIRYAENHRRKAEENTRSN* 397
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu10g00689 396 CDD F-box_AtFBW1-like 21 59 - -
Lapu10g00689 396 SUPERFAMILY F-box domain 15 94 IPR036047 GO:0005515
Lapu10g00689 396 SUPERFAMILY Galactose oxidase, central domain 111 361 IPR011043 -
Lapu10g00689 396 ProSiteProfiles F-box domain profile. 17 67 IPR001810 GO:0005515
Lapu10g00689 396 PANTHER F-BOX PROTEIN INTERACTION DOMAIN PROTEIN-RELATED 23 355 - -
Lapu10g00689 396 Pfam F-box domain 21 59 IPR001810 GO:0005515
Lapu10g00689 396 SMART fbox_2 23 63 IPR001810 GO:0005515
Lapu10g00689 396 Gene3D - 16 70 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu10g00689 Lapu-Chr10 8865517 8866838 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu10g00689 - - ccaj:109807229 441.425