Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu10g00680 ATGTCGGGCCCACCCAGAGTCCGATCCATGAACGTCGCCGATTCCGACGCGCGTCCTGTGCTCGTCCCAGCCGGCAACAAGGTCCGACCCGCCGTCGAAGGACGCAAGCCGGTGAAGAAATCGACGCCGGAGACAGAGAAGAAGCCGGTGATGCATTCAAATGCGCCCCCGCAATGCATCTCCGTTCCGCCGCCGTTGATTTTGCGGCGACAGGAGCGTCACCAGGCCGTGCTGAAAAACTTGTCGTCGATGAACGCATCTTGCTCCTCCGACGCGTCGTCGACGGATTCCTCCACTCACAGTAGCGGCGCGTCGTCAAGCGGGAAGGTGGCGCGTCGGGTTAGTGTGCAGTTGAGGAAGAAGCAGTGTGGTCCCAAGTCGGAAAAGGTGAGTAGTGACAATGTGGGTGGTTCTGATGATGCTGATTTGAGTGATAGCTTGGAGGGCAAGAAAAGGTGTGCTTGGGTTACACCAAACACAGAGCCATGCTATGTTGCTTTTCATGACAACGAGTGGGGAGTTCCTGTTCATGATGACAGGAAACTGTTTGAGTTGCTCAGCTTCTCTGGAGCCTTGGCTGAGCTTACGTGGCCTACAATTCTTAACAAAAGGCTGTTATTTCGGGAAGTCTTTTTGGATTTTGATCCTAGTGCTGTTTCTAGAATGAATGAGAAAAAGATAGCTGCACCAGGAAGTCCTGCCAACTCATTGCTGTCAGAACTCAGGTTGCGATCAATAATTGAAAATGCACGTCAGATGTGTAAGGTAATTGAAGAGTTTGGGTCTTTCGACACTTTTATTTGGAACTTTGTGAACCACAAGCCTATAGTGAACCAGTTCAGGTACCCACGCCAGGTACCTGTGAAATCTCCGAAAGCTGAAGTCATAAGTAAAGACCTTGTAAGGAGAGGTTTCAGGAGTGTTGGACCTACAGTCATCTATACTTTCATGCAAGTGGCTGGCCTAACGAATGACCATCTTATCAATTGCTTCAGATTCAAGGAGTGTACCTCCAATGCAGAAGCAATGGGCAAAGAGAGCTCCCTCAACTCTAAGGTCAAAGAGAAGGGAAACGACGAATCAACGGATGTGGGTCTACTGCTAGCTGTGAACAAAATGAACTTCACCTCTAAGTAG 1137 0.4996 MSGPPRVRSMNVADSDARPVLVPAGNKVRPAVEGRKPVKKSTPETEKKPVMHSNAPPQCISVPPPLILRRQERHQAVLKNLSSMNASCSSDASSTDSSTHSSGASSSGKVARRVSVQLRKKQCGPKSEKVSSDNVGGSDDADLSDSLEGKKRCAWVTPNTEPCYVAFHDNEWGVPVHDDRKLFELLSFSGALAELTWPTILNKRLLFREVFLDFDPSAVSRMNEKKIAAPGSPANSLLSELRLRSIIENARQMCKVIEEFGSFDTFIWNFVNHKPIVNQFRYPRQVPVKSPKAEVISKDLVRRGFRSVGPTVIYTFMQVAGLTNDHLINCFRFKECTSNAEAMGKESSLNSKVKEKGNDESTDVGLLLAVNKMNFTSK* 379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu10g00680 378 PANTHER OS04G0501200 PROTEIN 8 342 - -
Lapu10g00680 378 MobiDBLite consensus disorder prediction 1 63 - -
Lapu10g00680 378 MobiDBLite consensus disorder prediction 86 145 - -
Lapu10g00680 378 MobiDBLite consensus disorder prediction 32 47 - -
Lapu10g00680 378 Gene3D Hypothetical protein; domain 2 150 333 - -
Lapu10g00680 378 SUPERFAMILY DNA-glycosylase 151 336 IPR011257 GO:0003824|GO:0006281
Lapu10g00680 378 MobiDBLite consensus disorder prediction 86 112 - -
Lapu10g00680 378 Pfam Methyladenine glycosylase 159 332 IPR005019 GO:0006284|GO:0008725
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu10g00680 Lapu-Chr10 8810521 8816101 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu10g00680 K01246 - gmx:100805836 622.083