Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu10g00674 ATGTGCAAACATTCTGACCTGAAAATGGCCTCTCCTGATGAGACTGAGAGGAGTGTGGCAAAAAAACTTAGGCATTTGGGTAGGAAACTCCTCAAGGGCTCTTCACTTCACAAGCTTCTGCAGTTGCTTCATAAATTGAAGCTTGTATTATCAACTCTAGGTCAAGACCCAACTAAGCCAATTCAAGAATCACTTGTACCTTCCATGAAGGCACTGATTTCAGATGGACTTTTGAGAAACACAGATGAGGATGTGAAGATTCTAGTTATATCTTGCATCTCTGAGATTACAAGAATCACAGCGCCAGATGTCCCTTATGATGATGAACAAATGAAGGAAATCTTCAAGCTCACTGTTGCATCTTTTGAGAAGTTGTCTCACATATCTGGCCATGGCTATGAAAAAGCGCTTACCATACTTGATAATGTGAATAAGGTCAGATTATGCTTGGTCATGCTGGACCTTGAGTGTAATGACCTGGTTATTGAAATGTTTCAGCATTTCTTGAGATTTATAAGGTCAAACCATCCCTGTAATGCATTTCATTCAATGGAATCAATAATGACCTTGATCTTACAAGAAAGTGAACAAATTTCTCCAGATCTTCTTAGACCTCTCTTGGATAGTGTAGGGAATGAAAATAAGACTATTTCACCCATGTCTTGGACATTGGGGGAGAAAGTAATTAGCAACTGTAGTGCTAAGCTCAAGCCTTATCTCATGAAGGCAGTGGAGTCCTCAGGCAGAGCTCTAGATGAGTATGCACAGATAGTAAATGATATTTGCCAGAATGAATCTGAATCCCCTCAATGTGATGATTCAAATGATTCTAAGACAGTGGCTCAGGAAGCTGAGAACAAACTTAATGTTCCTAAGGATGCAAAGGAACAACCATATGATGAAACCAAGGGTCATGAACCCGATGTTACTGATAAGAGAGATGTCCAAATTTTAGATGATAGAAAGTCAAACAGATGTGCAACTACGGATGCTGAAGTTATAAAAAAAACTGGTTCAAAAAGGAGATCACATTCTGAAGTTACCAAGAACTCTAAAAGAAGGAGTGCAAAAGCCAAGTTGGAAACTGACAATTTAGAGTCAGTTCATGAACCAAAATCAGAAACTCAGCTGAATACTGTGCCAAGGAAGAGGGGCCGTAAGCCTAATTCTCTAATGAATGCTGAAGAAGGCTATGATCACTTGTGGATTTATCGGAAAACTGAAGTTGGAAAATCAACACTATCCAGAAAGACTCGTGATTCAAGGTCTCCTTTGCCATCTTCTGAGAAACCTACTTCCAGAAAAGGTGAGTTGCATCGAAAGCCTAAAACTGTAAGTGAAACTCTGGTTTATAAGCCGAAAAGTGAGAACATAGCAAAACCTACCAAATCCAGAAGGACTCACAAGATCGACAATGATTTTCCCCCTAATGGCACAAGTGAAGGTCGTGAAGCTTTAGCTTCTAAACCTAAAACTGATGATAATACTGATGCTTCTCCTTCTATAAATATTAATATTTCTGATGGATGTCACACCAAACGAGGTCGGAGAGGGAAAATAAGTAGCACTGGGAATCAAGGTGTTCATTCCAATTCTTTGTCAATGTTAAAAGAAAAATTGAATCCTCTGCCTGCGAAAATTTCTTTGGATTCCCCAACAGTTACGTTGGAAAAGGAATCTGAAGGAAGGAACATCTCTGAGCAAAAATCCATTAGGAAAATCAAATTTTCTGTAAAGATTGATGGAAAACTTGTCTTGGGTCCTGAATCAACTGCTAATAGGGAGCCTAACATTTCATGTGGAGATGAGGGAAAACGCAAGTCATCTATGAATGATGAGCTAGAAAATATTAAAGAGGGCAGATTCTCAACTCAAACAAATGTTAAGAAAAGGAGGAGGCTTGATGCTACGCCTAATGAGGGCCTCAACAAATCATCAGCTGTGAAGGAGCTGATTGCAGAATCTGCAAGTAAAACACTAAATGGTGTCAAGGAAGCCCCACAAACAAGGCTGAGGAGAAGACACAGTAATGTGAGTCCCAAGGCATCTGAATCTCATCACAATGGTAACTCATTGGTTGGTAGTAGAATCAAGGTCTGGTGGCCACAAGATAAGACGTTTTATGAAGGTGTTATCGATTCTTATGATCCTATTAAAGGAAAGCATAAGATTTTGTATGCCGATGGTGATGTTGAAGTGTTGAACCTCAAAAGACAGCGTTGGAAACTAGTTGATGTTTCGTTAGATGAGGAAGGAGTTGCACTTCAGAGGCTTGCAGAAGCATCAGACATAGCAGAAAAAGGCAAGGAAAAGTCAGAATTGGAGTCAGCCAAAGCTGCAACTATCAAATCTCAGTCCAGGAAAGACTCTAAGAAGCCTAAAAGCCGTAAGAGGGACAACTGA 2403 0.3987 MCKHSDLKMASPDETERSVAKKLRHLGRKLLKGSSLHKLLQLLHKLKLVLSTLGQDPTKPIQESLVPSMKALISDGLLRNTDEDVKILVISCISEITRITAPDVPYDDEQMKEIFKLTVASFEKLSHISGHGYEKALTILDNVNKVRLCLVMLDLECNDLVIEMFQHFLRFIRSNHPCNAFHSMESIMTLILQESEQISPDLLRPLLDSVGNENKTISPMSWTLGEKVISNCSAKLKPYLMKAVESSGRALDEYAQIVNDICQNESESPQCDDSNDSKTVAQEAENKLNVPKDAKEQPYDETKGHEPDVTDKRDVQILDDRKSNRCATTDAEVIKKTGSKRRSHSEVTKNSKRRSAKAKLETDNLESVHEPKSETQLNTVPRKRGRKPNSLMNAEEGYDHLWIYRKTEVGKSTLSRKTRDSRSPLPSSEKPTSRKGELHRKPKTVSETLVYKPKSENIAKPTKSRRTHKIDNDFPPNGTSEGREALASKPKTDDNTDASPSININISDGCHTKRGRRGKISSTGNQGVHSNSLSMLKEKLNPLPAKISLDSPTVTLEKESEGRNISEQKSIRKIKFSVKIDGKLVLGPESTANREPNISCGDEGKRKSSMNDELENIKEGRFSTQTNVKKRRRLDATPNEGLNKSSAVKELIAESASKTLNGVKEAPQTRLRRRHSNVSPKASESHHNGNSLVGSRIKVWWPQDKTFYEGVIDSYDPIKGKHKILYADGDVEVLNLKRQRWKLVDVSLDEEGVALQRLAEASDIAEKGKEKSELESAKAATIKSQSRKDSKKPKSRKRDN* 801
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu10g00674 800 Gene3D - 684 738 - -
Lapu10g00674 800 CDD Tudor_Agenet_AtEML-like 693 743 - -
Lapu10g00674 800 MobiDBLite consensus disorder prediction 492 508 - -
Lapu10g00674 800 MobiDBLite consensus disorder prediction 765 788 - -
Lapu10g00674 800 MobiDBLite consensus disorder prediction 265 284 - -
Lapu10g00674 800 MobiDBLite consensus disorder prediction 667 681 - -
Lapu10g00674 800 Pfam Sister chromatid cohesion protein PDS5 protein 38 241 - -
Lapu10g00674 800 PANTHER ANDROGEN INDUCED INHIBITOR OF PROLIFERATION AS3 / PDS5-RELATED 277 795 IPR039776 GO:0007064
Lapu10g00674 800 MobiDBLite consensus disorder prediction 765 800 - -
Lapu10g00674 800 FunFam Binding protein 688 740 - -
Lapu10g00674 800 SUPERFAMILY Tudor/PWWP/MBT 690 731 - -
Lapu10g00674 800 MobiDBLite consensus disorder prediction 399 424 - -
Lapu10g00674 800 MobiDBLite consensus disorder prediction 288 381 - -
Lapu10g00674 800 MobiDBLite consensus disorder prediction 432 447 - -
Lapu10g00674 800 SUPERFAMILY ARM repeat 30 254 IPR016024 -
Lapu10g00674 800 MobiDBLite consensus disorder prediction 265 531 - -
Lapu10g00674 800 MobiDBLite consensus disorder prediction 664 690 - -
Lapu10g00674 800 MobiDBLite consensus disorder prediction 590 612 - -
Lapu10g00674 800 MobiDBLite consensus disorder prediction 458 472 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu10g00674 Lapu-Chr10 8758548 8769867 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu10g00674 - - vra:106773633 1204.12