Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu10g00671 ATGGATTACAGCTCCGAAGAAGATTCAGATATTAGTGAATCTGAGATTTATGACTACTCAGAGAAACCATATGAACTGTTAAGGGCGGGAAAATACAAGGTTAAAAATTTGAATGGAACTCTTAGATGCCCTTACTGTGCTGGGAAGAAAAAACAAGACTACAAATACAAGGATTTATTGCAACATGCTTCTGGAGTTGGTAAGGGTTCTGCTAACAGAAGTGCAAAACAAAAGGCAAATCACCTTGCTCTGGCAAAGTATTTGGAGACTGATCTATCCAGTGAAGCAGAGCCAATCCAGCACCCAGCTTTACCCCAAGCTGTTAGTCAACCTTCGCAACAAGAAGATCTTTATTATGTTTGGCCCTGGACAGGGATAGTTGTTAACATAAAGGGTAGATCAATTGATTCTAGACACTGGTTGAAGGAATTTGCTAAATTTAGACCAATTGATTTCCATGTATTCACGGAAGATGGTGACATGACTGCTCAAGCTGTAATAGACTTCAATAATGACTGGAATGGTTTCATAAATGCAAGTGAATTCGAGAAGTCTTTTGAAACCGCACATCATGGTAAAAAGGATTGGAGTTCAAGGAAGTTAGAAGCTGACTCAAACATTTATGGATGGGTTGCACGGGAAGATGATTATAATTGTGGAGGGCCAATAGGGGAATACCTCCGCAACAAAGGAACATTGAGGACAGTTTCAGATATTGTTCAAGAAGCATCTGAAAGCAGAAATAGTATTGTGACAAACCTCACTAAAGAAATCGAGATCACGAATGAAAACCTTGACAAAATGCAGTCTAAGTTTAATGAGAAGACTATGTCCTTGAGTAGGATGCTTGAGGAGAAAGATAAGCTTCACAATGCTTTTGAAGAAGAATCAAGGAATATGCAGCGTAGAGCACGCAATGAGGTACGGCGGATCTTGGATGAGCAAGAAAAATTGAGTAGTGAGTTGGATGAGAAAAGGAGGAAGCTTGATTCTTGGAGTAGAGATCTAAACAAGCGGGAGGTACTGACTGATCAAGAGAGACAGAAACTTGCGGAGGATAAGAAGAAGAAAGATTTGAGGAATGAATCACTCTTGTTGGCTTCAAAAGAACAGAAGATAGCGGATGAAAATGTCTTAAGGCTTGTTGAAGAGCAGAAGCGAGAGAAAGAGGAGGCCTATAATAAGATACTTCTGCTGGAAAAACAGCTTGATGCCAAACAGAAATTGGAAATGGAAATTGAAGAGCTAAAAGGGAAATTGCAAGTTATGAAGCATCTTGGAGACGAAGATGATACAGCTGTTCAGAAAAAAATAAAAGAAATGAATGATGAATTGCAAGAAAAAATAGAGAATTTGGAATGTGTAGAGAGCATGAATCAAACCCTCATTGTGAAGGAGCGCCAGAGTAATGATGAACTGCAGGAAGCTCGCAAAGAATTAATAAAAGGGTTAGAGGATATGCTGAATTGTCCTAGAACCCATATTGGGCTCAAGAGAATGGGAGAGCTTGATCAGAAGGTTTTTGTGGCTAACTACAAGAAAAGATTTCCTCATGAAGAAGCTGGAACCAAAGGTGTCGAGCTTTGCTCTTTGTGGCAGGAAAACGTGAAGAATTCTGCTTGGCATCCATTTAAAGTGATCATAGATAATGATAAAGCAGAGAATATTATAGATGAGGATGATGTCAAGTTACGAAGCCTCAAGCAGGAATGGGGAGATGAGATATATTCAGCTGTTGTAACAGCCTTAACAGAAATAAATGATTACAATGCAAGCGGTGGGTATACTGTTCTGGAGCTATGGAACTTCAAGGAAAAAAGAAAGGCTACATTGAAAGAAGTTATCACTTATATTATGGGACAAATCAAGCCAGTTAAGCGCAAGAGAGGATAG 1893 0.393 MDYSSEEDSDISESEIYDYSEKPYELLRAGKYKVKNLNGTLRCPYCAGKKKQDYKYKDLLQHASGVGKGSANRSAKQKANHLALAKYLETDLSSEAEPIQHPALPQAVSQPSQQEDLYYVWPWTGIVVNIKGRSIDSRHWLKEFAKFRPIDFHVFTEDGDMTAQAVIDFNNDWNGFINASEFEKSFETAHHGKKDWSSRKLEADSNIYGWVAREDDYNCGGPIGEYLRNKGTLRTVSDIVQEASESRNSIVTNLTKEIEITNENLDKMQSKFNEKTMSLSRMLEEKDKLHNAFEEESRNMQRRARNEVRRILDEQEKLSSELDEKRRKLDSWSRDLNKREVLTDQERQKLAEDKKKKDLRNESLLLASKEQKIADENVLRLVEEQKREKEEAYNKILLLEKQLDAKQKLEMEIEELKGKLQVMKHLGDEDDTAVQKKIKEMNDELQEKIENLECVESMNQTLIVKERQSNDELQEARKELIKGLEDMLNCPRTHIGLKRMGELDQKVFVANYKKRFPHEEAGTKGVELCSLWQENVKNSAWHPFKVIIDNDKAENIIDEDDVKLRSLKQEWGDEIYSAVVTALTEINDYNASGGYTVLELWNFKEKRKATLKEVITYIMGQIKPVKRKRG* 631
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu10g00671 630 Pfam XH domain 498 628 IPR005379 -
Lapu10g00671 630 Coils Coil 382 426 - -
Lapu10g00671 630 Coils Coil 550 570 - -
Lapu10g00671 630 PANTHER RIBONUCLEASE P SUBUNIT P38 3 629 IPR045177 GO:0080188
Lapu10g00671 630 Coils Coil 435 479 - -
Lapu10g00671 630 Coils Coil 251 271 - -
Lapu10g00671 630 Pfam XS domain 119 218 IPR005380 GO:0031047
Lapu10g00671 630 Pfam XS zinc finger domain 43 85 IPR005381 GO:0031047
Lapu10g00671 630 Coils Coil 342 362 - -
Lapu10g00671 630 Coils Coil 279 335 - -
Lapu10g00671 630 Gene3D XS domain 112 273 IPR038588 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu10g00671 Lapu-Chr10 8740053 8746771 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu10g00671 - - pvu:PHAVU_010G160300g 1145.57