Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu10g00669 ATGGAGGTTCCGAGTTCCTGGGATGCCCTTCGCAAGCAGGCGAGAAAACTTGAAGCTCAGTTGGATGAGCAGATGAATTCTTATCGTAAATTGGTTTCTGCTAATGTTTCCTCAAAAGCTGATGCTTCCGAGAGTGATCTAGAGTCTTGGATTGAGCGATTACTAAAACAACTACAACAAGTAAATGCACAGATGCATGCTTGGGTGTCATCCGGTGGTTCAGAAATGGTTTCTCACACTTTGACTAGACACCAAGAAATTCTTCAAGATCTCACCCAGGAATTTTATCGTCTTCGTTCAAGTCTTCTAGCTAAGCAAGAGCATGCTTCACTGCTAGAAGATTTTAAAGAATTTGATCGGACTAGATTAGACTTGGAACAAGGTGTAGACACTGAACAGCATGCACTCCTAAAAGAGCGGGCATCTATAAGCCGAAGTACAGGACATATGGACAATGTTATTTCACAAGCACAAGCAACGCTGGGAGCACTTGTCTTCCAACGTTCGACATTTGGCGGTATCAATTCGAAGCTTGGCAACGTGAGCAGTCGCCTCCCAACGGTAAATAACATACTTTCGGCAATAAAGAGGAAAAAGTCAATGGATAGCATTATACTTTCCCTTGTTGCAGCCGTATGTACATTTCTCATTTTCATCTACTGGCTATCCAAGTGA 675 0.4281 MEVPSSWDALRKQARKLEAQLDEQMNSYRKLVSANVSSKADASESDLESWIERLLKQLQQVNAQMHAWVSSGGSEMVSHTLTRHQEILQDLTQEFYRLRSSLLAKQEHASLLEDFKEFDRTRLDLEQGVDTEQHALLKERASISRSTGHMDNVISQAQATLGALVFQRSTFGGINSKLGNVSSRLPTVNNILSAIKRKKSMDSIILSLVAAVCTFLIFIYWLSK* 225
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu10g00669 224 Coils Coil 7 34 - -
Lapu10g00669 224 PANTHER GOS-28 SNARE- RELATED 4 223 IPR023601 GO:0000139|GO:0005801|GO:0006888|GO:0016020
Lapu10g00669 224 Pfam Snare region anchored in the vesicle membrane C-terminus 135 199 - -
Lapu10g00669 224 PIRSF Golgi_SNARE 1 223 IPR023601 GO:0000139|GO:0005801|GO:0006888|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu10g00669 Lapu-Chr10 8724799 8730061 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu10g00669 K08495 - gmx:100797885 406.371