Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu10g00665 ATGCTGTGCAGGAAGAGCTCCAAAAACGGCGTCGCTTCGGGATCGGTCCCGGTGTGCCTCAACGTCTACGATCTGACACCAATAAATGGTTACGCTTACTGGTTCGGCCTCGGAGTGTACCATTCCGGCGTGCAAGTTCACGGCGTTGAATTCGCGTTCGGGGCTCACGAGTACCCGTCGACGGGGATATTCGAAGGCGAACCGAAGAGGTGCGAAGGTTTCACTTTCAGAAAAACGATTCTGATCGGAAAAACCGACATGGGACCAGGTGAGGTGAAGGCGGTTATGGAAGAACTCGCTGCTGAATACAGAGGGGATGCTTACAATCTCATCACAAAGAATTGCAACCATTTCTGCAACGATGCTTGTCTAAGACTCACCGGAAATCCTATCCCAAGTTGGGTCAATCGCCTTGCCAGAATCGGGTTTTTGTGCAACTGTGTTCTGCCTGTGACATTGAACTCGACCAAAGTTAGGCATCACAGAATGGAAGAGAAGCAATGTGAGGGAGAGAAGGAAGCATTAGCGAGTGAGGGAAAGAAGCAGAGTGCATCAAATTCAACACCATCCCCTGCGAGAGGGCGCAGGGGAAGGAGTAGAACCCGACGCCCCCTCCCTCCACCTTCTCCCTTGATTATTGGGTCTTCTTCATGA 654 0.5153 MLCRKSSKNGVASGSVPVCLNVYDLTPINGYAYWFGLGVYHSGVQVHGVEFAFGAHEYPSTGIFEGEPKRCEGFTFRKTILIGKTDMGPGEVKAVMEELAAEYRGDAYNLITKNCNHFCNDACLRLTGNPIPSWVNRLARIGFLCNCVLPVTLNSTKVRHHRMEEKQCEGEKEALASEGKKQSASNSTPSPARGRRGRSRTRRPLPPPSPLIIGSSS* 218
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu10g00665 217 Pfam PPPDE putative peptidase domain 17 150 IPR008580 GO:0008233
Lapu10g00665 217 MobiDBLite consensus disorder prediction 164 178 - -
Lapu10g00665 217 MobiDBLite consensus disorder prediction 164 217 - -
Lapu10g00665 217 Gene3D PPPDE domains 12 171 IPR042266 -
Lapu10g00665 217 ProSiteProfiles PPPDE domain profile. 16 153 IPR008580 GO:0008233
Lapu10g00665 217 PANTHER DESUMOYLATING ISOPEPTIDASE 15 188 IPR008580 GO:0008233
Lapu10g00665 217 SMART DUF862_2a 16 154 IPR008580 GO:0008233
Lapu10g00665 217 MobiDBLite consensus disorder prediction 179 194 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu10g00665 Lapu-Chr10 8701844 8704537 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu10g00665 K22763 - gmx:100817929 360.147
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu10g00665 10 8701844 8704537 Lapu10g00665 10 8701844 8704537 ECH