Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu10g00664 ATGCGACGCTCTTCTGCATCCAAAAAGACGGGTCAATCCTATTCCACTCCCACCGCCACCGATCTCTTCCGCTCCGCTTCAAGTAAGGCAAGCTCGAAGGAATCTGAACGAATTGATAGTCTATTCTATTCATTTGCTAATGGGTCTACTGGGATGATTGACCCAGATGGAATTGAAACACTTTGTGCTGCTATGGAGGTTAATCATACAGATGTGAGGGTTTTGATGCTTGCATGGAAAATGAAAGCTGAGGAGCAAGGATATTTTACATTGGACGAGTGGAAGAGAGGCTTAAAAGCATTAAGGGCCGATACAGTTAGTAAATTGAGGAAGGCACTTTCAGACCTAGAAATAGAGGTCAGGAGGCCATCGAACTTTTCAGATTTCTATTCATATGCTTTCCAATATTGTTTAACAGAGGAGAAACAGAAAAGCATTGATATAGAGAGCATTTGTGAGTTACTTACTCTTGTTTTGGGTTCAACGTTTCCGTCCCAAGTCAACTCATTTGTGGAATATTTGAAGACTCAAAATGATTACAAGGTCATAAACATGGATCAATGGATGGGATTTTTCCGCTTTTGCAACGAGATAAGTTATCCAACCCTTAATGATTATGATCCTGAGCTTGCCTGGCCCTTGATCCTGGACAATTTCGTTGAATGGGTGCGAGAAAAGGAAAAATAA 687 0.4119 MRRSSASKKTGQSYSTPTATDLFRSASSKASSKESERIDSLFYSFANGSTGMIDPDGIETLCAAMEVNHTDVRVLMLAWKMKAEEQGYFTLDEWKRGLKALRADTVSKLRKALSDLEIEVRRPSNFSDFYSYAFQYCLTEEKQKSIDIESICELLTLVLGSTFPSQVNSFVEYLKTQNDYKVINMDQWMGFFRFCNEISYPTLNDYDPELAWPLILDNFVEWVREKEK* 229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu10g00664 228 ProSiteProfiles DCUN1 domain profile. 33 224 IPR005176 -
Lapu10g00664 228 SUPERFAMILY EF-hand 28 194 IPR011992 -
Lapu10g00664 228 PANTHER RP42 RELATED 8 227 IPR014764 -
Lapu10g00664 228 Gene3D Cullin, PONY binding domain 123 228 IPR042460 -
Lapu10g00664 228 Gene3D - 31 121 - -
Lapu10g00664 228 Pfam Cullin binding 108 222 IPR005176 -
Lapu10g00664 228 FunFam Defective in cullin neddylation protein 123 228 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu10g00664 Lapu-Chr10 8693799 8698816 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu10g00664 K17824 - gmx:100776788 422.935
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu10g00664 10 8693799 8698816 Lapu10g00664 10 8693799 8698816 ECH