Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu10g00659 ATGGCCCTTCTTCTCCGTTTCCATCGTCGAAGCACAACCAGCTCTCGCATCCTCTTTTTCTCTACTTCCAATTCCGATTCTAACTCTCCCTTCTCTTCCCTTTTCAGAGAAATCAGGGACAATCTCAAACAACCACCTGCACCTTCCTCTAACCTTCGCTCCCAACAACCCTTCACAAACGAGATCCGAAAAAATCTCTCAGAGTTCCGTGCTCGCACCACTCCACCTCCGCCCGGCGACCCGTCGCAGCAGCCCCGGCAGTTCTCGTTCCAGGACATTTACCAGCGCAACATGCAGCGCAACAGTCAGAGCAATCCCCCCAGATCGGGAGAATCGCCCTCTCTTAATATTGACCCCATTCGCGAGAGAGTACGGAACATGGCCGGCGCCCAAACCTCGCTGCGGCAGAGCCGGCCCGGGGTGATAGGCGGAACGAGCGCCTTGCCGCAGTCCATTTTCGGGAAGGAGCTGAGGAGAGAGGACTCGGCGTCGACGGCGATGTTTTCGGCAGGGTTCTTGAAGACCTATAGCGTGGAGGTTTTGGGGAAGAAATTGAGGATGCTGAGGCCGGAGGGAAAGGAGAAGGATTGGTTTTCAGTGAGGGAGTTGAGTGAGAGACTGGTGAGGTTGAGGCAGACAGAGGAGGAGCAAGCCCGTTCCAATACCCAAGGTGATACTTTTGACAAAATAAGAGGATGTCTCGTTGAGTTGAATGAAGGGGAAACTCTCGCAGCTAAGAAAGCTTCAATGCAGGGACTTAGTATATTGACTCACTTGAGTGGGACTCCAACCTTCTCTCTCGAACCTCCTAAACCCCATCTTGTTGAGAAGTACTTTCATCCGGATAATATGTCCTCTGCTGAGAAGATGAAAATTGAGCTTGCCAAGGTTAGAGATGAGTTTAAAATGTCGGAGTCAGACTGTGGTTCTGCGCGTGTTCAAATTGCGCAACTCACAACTAAGATCAAGCATCTATCAGCAGTTCTACACAAGAAGGATGTTCATTCTCGTAAAGGTTTGGTAGCAATGGTTCAGAGGAGAAAAAGATTACTGAAATATCTCAGAAGAACTGATTGGGATTCCTATTGTTTTGTTATTTACAAGCTGGGCCTACGTGATAATCCTGATTATAGCTATAGAACTCGAACTGGTACGGCGGCATAG 1164 0.4966 MALLLRFHRRSTTSSRILFFSTSNSDSNSPFSSLFREIRDNLKQPPAPSSNLRSQQPFTNEIRKNLSEFRARTTPPPPGDPSQQPRQFSFQDIYQRNMQRNSQSNPPRSGESPSLNIDPIRERVRNMAGAQTSLRQSRPGVIGGTSALPQSIFGKELRREDSASTAMFSAGFLKTYSVEVLGKKLRMLRPEGKEKDWFSVRELSERLVRLRQTEEEQARSNTQGDTFDKIRGCLVELNEGETLAAKKASMQGLSILTHLSGTPTFSLEPPKPHLVEKYFHPDNMSSAEKMKIELAKVRDEFKMSESDCGSARVQIAQLTTKIKHLSAVLHKKDVHSRKGLVAMVQRRKRLLKYLRRTDWDSYCFVIYKLGLRDNPDYSYRTRTGTAA* 388
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu10g00659 387 Pfam Ribosomal protein S15 296 372 IPR000589 GO:0003735|GO:0005840|GO:0006412
Lapu10g00659 387 NCBIfam 30S ribosomal protein S15 293 372 IPR005290 GO:0003735|GO:0005840|GO:0006412
Lapu10g00659 387 Coils Coil 200 220 - -
Lapu10g00659 387 PANTHER S15/NS1, RNA-BINDING PROTEIN 15 379 - -
Lapu10g00659 387 SUPERFAMILY S15/NS1 RNA-binding domain 293 373 IPR009068 -
Lapu10g00659 387 Coils Coil 287 307 - -
Lapu10g00659 387 Hamap 30S ribosomal protein S15 [rpsO]. 284 373 IPR005290 GO:0003735|GO:0005840|GO:0006412
Lapu10g00659 387 Gene3D - 288 337 - -
Lapu10g00659 387 Gene3D - 339 374 - -
Lapu10g00659 387 SMART Ribosomal_S15_2 294 372 IPR000589 GO:0003735|GO:0005840|GO:0006412
Lapu10g00659 387 CDD Ribosomal_S15p_S13e 296 370 IPR000589 GO:0003735|GO:0005840|GO:0006412
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu10g00659 - - ccaj:109818150 441.81