Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu10g00647 ATGGGGGGAGCATGTTCTAGGAAGCGAGAGCAGGACAATGAAGATAGTCTTATCAGAGGACTATCACGAAGATATTTCAAATGTGGGAGTTTGAAATGGTGGACATCCTCTTTTTCTTATCCATCTGTTGATGATCACTTACGAAAAGGAGAATGTCCACCACTGTTGGACTTGTGCATACAGAAAATAAATGAGGACATTGATAAATATGCAGCATTTTCTATGCTGCCAAGGGATATAAGTCAGTTAATTTTTAATAATTTGGTTTATTCCAGACGTCTAACCAGTGCATCCTTAGAAGCTTTTCGAGATTGTGCTCTACAGGATCTTTACTTAGGAGAATATGATGGTGTTAATGATAATTGGATGGGCGTCATCTCATCCCAGGGTTCATCTTTACTTTCTCTAGATCTTTCTGGGTCTGATGTCACTGATTTTGGGCTAACATACCTTAAAGATTGTGAAAGTCTCATTTCTTTGAATCTAAATTACTGTGATCAAATTTCAGATAGTGGACTAGAGTGTATCAGTGGCCTGTCAAACTTGACAAGTTTGAGTATTAGACGAAATGATTCAATTTCTGCTAAAGGAATGAGTGCATTTTCTGGTCTTGTTAACTTGGTCAAGTTGGATTTGGAGAGATGTCCTGGGATTCATGGAGGCCTAGTTCATCTTCGAGGTTTGACCAAGTTGGAATCTCTCAATTTAAAGTGGTGTAATTGCATAACTGATTATGATATGAAACCTCTTTCAGAGCTTGCTAGCCTGAGAAGTCTAGAGATTTCATCCAGTAAAGTCACTGATTTTGGCATCAGTTTCCTTAAAGGGCTACAGGAGCTTGCCCTGTTAAATTTGGAAGGATGCCTTGTAACAGCTGCATGCTTGGATTCTCTTGCAGAGCTTCCGGCACTGTCAAACTTGAATCTTAATAGATGCAATCTCTCTGACAATGGGTGCAAAAAATTCTCACGATTGACAAAGTTGGAGAGCTTGAACCTTGATTCATGTAAGATTGGTGATGAAGGGTTGGTCAATTTAGCTGGCCATAAGCGATTGAAATGCTTGGAATTGTCTGATACAGAAGTTGGAAGCAATGGGCTACACCATTTATCAGGATTGTCTAATCTACAGAAAATAAATCTTTCTTTTACCATGGTTAGTGATGGTGGTTTAAGCAAATTGTGTGGACTCTCATCTCTGAAGTCACTTAATTTGGATGCTTACCAAATTTCTGATACTGGGCTGTCAAACCTTACAAGTTTGACTGGCCTCACTGACCTGGATTTGTTTGGTGCACGAATCACAGATTTTGGTACAAACTATTTGAAAAAGTTTAAGAACCTGAGGTCTTTGGAAATATGTGGTGGGGCATTGACTGATGCTGGTGTGAAAAATATCAAAGAGCTTTCTTCTCTGGTCTGCTTAAATTTATCACAAAACAGCAATCTTACTGACAAAACACTTGAGTTAATCTCTGGGCTTACTGGGTTGGTTTCTTTGAATGTTTCAAATTCTCGTATCACCAATGCTGGTCTGCAGCATTTGAAAACACTCAAGAACTTGAGATCTCTGACATTGGAGTCCTGTAAGGTGACAACAATTGACATGAAGAAACTGAAATCAATATACCTCCCGAATCTGGTAAGCTTTCGGCCAGGTTATCGTACTGATGTATGGCAGAGAATAATGGAAAGACGACCACTAATTGTATATAGGACGTGTTTGCCTCTACTGTAA 1737 0.3915 MGGACSRKREQDNEDSLIRGLSRRYFKCGSLKWWTSSFSYPSVDDHLRKGECPPLLDLCIQKINEDIDKYAAFSMLPRDISQLIFNNLVYSRRLTSASLEAFRDCALQDLYLGEYDGVNDNWMGVISSQGSSLLSLDLSGSDVTDFGLTYLKDCESLISLNLNYCDQISDSGLECISGLSNLTSLSIRRNDSISAKGMSAFSGLVNLVKLDLERCPGIHGGLVHLRGLTKLESLNLKWCNCITDYDMKPLSELASLRSLEISSSKVTDFGISFLKGLQELALLNLEGCLVTAACLDSLAELPALSNLNLNRCNLSDNGCKKFSRLTKLESLNLDSCKIGDEGLVNLAGHKRLKCLELSDTEVGSNGLHHLSGLSNLQKINLSFTMVSDGGLSKLCGLSSLKSLNLDAYQISDTGLSNLTSLTGLTDLDLFGARITDFGTNYLKKFKNLRSLEICGGALTDAGVKNIKELSSLVCLNLSQNSNLTDKTLELISGLTGLVSLNVSNSRITNAGLQHLKTLKNLRSLTLESCKVTTIDMKKLKSIYLPNLVSFRPGYRTDVWQRIMERRPLIVYRTCLPLL* 579
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu10g00647 578 FunFam Predicted protein 118 219 - -
Lapu10g00647 578 PANTHER UNCHARACTERIZED 51 244 - -
Lapu10g00647 578 Gene3D Ribonuclease Inhibitor 220 294 IPR032675 -
Lapu10g00647 578 Pfam Leucine rich repeat 447 507 IPR001611 GO:0005515
Lapu10g00647 578 FunFam Leucine-rich repeat family protein 220 298 - -
Lapu10g00647 578 SMART LRR_CC_2 469 494 IPR006553 -
Lapu10g00647 578 SMART LRR_CC_2 326 349 IPR006553 -
Lapu10g00647 578 SMART LRR_CC_2 228 253 IPR006553 -
Lapu10g00647 578 SMART LRR_CC_2 397 421 IPR006553 -
Lapu10g00647 578 SMART LRR_CC_2 180 204 IPR006553 -
Lapu10g00647 578 SMART LRR_CC_2 518 542 IPR006553 -
Lapu10g00647 578 SMART LRR_CC_2 154 179 IPR006553 -
Lapu10g00647 578 SMART LRR_CC_2 301 325 IPR006553 -
Lapu10g00647 578 FunFam Leucine-rich repeat family protein 450 549 - -
Lapu10g00647 578 Pfam Leucine Rich repeat 154 177 IPR001611 GO:0005515
Lapu10g00647 578 Pfam Leucine Rich repeat 180 202 IPR001611 GO:0005515
Lapu10g00647 578 Pfam Leucine Rich repeat 326 347 IPR001611 GO:0005515
Lapu10g00647 578 Pfam Leucine Rich repeat 229 250 IPR001611 GO:0005515
Lapu10g00647 578 SUPERFAMILY RNI-like 273 543 - -
Lapu10g00647 578 Gene3D Ribonuclease Inhibitor 383 455 IPR032675 -
Lapu10g00647 578 Gene3D Ribonuclease Inhibitor 125 219 IPR032675 -
Lapu10g00647 578 Gene3D Ribonuclease Inhibitor 456 548 IPR032675 -
Lapu10g00647 578 Gene3D Ribonuclease Inhibitor 295 382 IPR032675 -
Lapu10g00647 578 SUPERFAMILY RNI-like 116 360 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu10g00647 Lapu-Chr10 8489791 8502582 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu10g00647 106 403 Receptor kinase-like Gene Family AT5G51350 27.492 1.87e-08 55.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu10g00647 - - gmx:100800666 962.6
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu10g00647 10 8489791 8502582 Lapu10g00647 10 8489791 8502582 ECH