Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu10g00643 ATGCCCCCAAGATCAGGAAAAGGGAAATCCAATAAAGCAAAGGCAGAGAAGAAGAAAAAGGAAGAGAAAGCAGCAGCAGCACCTTCTCTTGTTGACATCACTGTGGTCACTCCATATGATACACAGATTCTCTTGAAGGGTATCTCTACTGATAAGATACTTGATGTAAGGAAACTATTGGCTGTGAAGGTGGAGACATGCCATTTCACAAACTATTCTTTATCCCATGAGGCTAAAGGTCATAAATTAAATGACAGAGTGGAAATTGCTACCCTAAAGCCATGTCTTCTAAGAATGGTTGAAGAGGATTACACAGAGGAGGCCCAAGCGATTGCGCACGTGCGGAGGGTTCTGGACATTGTAGCCTGCACAACAAGGTTCGGTAGGGCCAAAAGGAGTTTACCAAGCCCAGATTCAAGGCCCAAAAAAAACGGCAAGGCCCAACATCAGAACAAGACGAGTTTGAGCCCACCCGATACGCCGAATGGGGAATCCCGGGTCGGGTCACCGTCGTCGGAGGCGCCGCCATCGGCGATCTCCGATAGCGTGGGGATGAAGGCCATTCACCCGACACCTAAGCTCTCAGATTTCTACGAGTTCTTCTCCTTGTCTCACCTCTCTCCCCCCATTTTACAATTGAAGAGATGTGAACTGAAGGATGAAGATGATAAGCGCAAGGGAGATTATTTTCTGCTTCAGGTTAAAATATGCAATGGGAAGGTAATAGAAGTGGTTGGTTCAGAGAAAGGGTTTTACACTGTAGGGAAGCAGCCTCTGCACAGCCACACCTTGGTTGATCTTCTCCAACAGCTCAGCCGAGCCTTTGCTAATGCATATGAATCCTTGATGAAAGCCTTTTTGGAACGTAATAAGTTTGGAAATCTTCCATATGGATTCCGAGCAAATACATGGCTTGTCCCTCCATCTGTAGCCGAGTCTCCTTCAAGCTTTCCTGCATTGCCCGCAGAGGATGAAAACTGGGGTGGTAACGGTGGTGGGCAAGGGAGAAATGGTGAATTCGATCTTAGACCATGGGCAACGGATTTTAAAATATTGGCCTCTCTTCCTTGCAAAACTGAGGAGGAGAGAGTGGTCAGGGATAGAAAAGCATTTCTGCTTCACAATCAATTTGTTGATACCTCAATATTTAAGGCTGTTGCGGCTATACGTCATGTTATGGAATCCAACTCAAACATGAAGAATGAATTGAATTCTTCTCCGGGTTCTGTTCAGCATGAAGATCACGTGGGAGACTTATCCATTATAGTCAAACGTGACATCCAGGATGGAAATAAAAAGCACGACTCTAAACCAGTTGAATCCATTGTGCACAAGGAGGATAGTCAGAAGAATTTAATCAAAGGATTGACAGCAGATGAAAGTGTAATTGTTCATGATATTTCTTCCTTGGCTGTCGTTGTTGTACACCACTGTGGATATACTGCAACAGTAAAGGTTGTGGGTAATGTGAACATGAGGAAGCCTAAAGTTCGAGACATTGAGATAGATGATCAGCCAGATGGTGGGGCAAATGCTCTCAACATCAACAGTTTGAGGCTACTGCTTCACAAGTCTGGATCTGATTCATTAGAAGGGAATTTATCATCCCTATCAAATTCAGATGACTTAGATGCTACTAAAAGCCTTGTTCGGAAGGTTGTTCAAGAAGGCATAGAAAAAATAAAGGAGGAGCCAAGTGTTTCAAAAAGGTCTATTCGATGGGAACTTGGTTCCTGTTGGATGCAGCACTTGCAAAAACAGGAAACTTCATCTGATAACAGTTCAAAAAACAAAGAAGATGGCAATGACGTTGAGCAAGCTGTTAAAGGTCTTGGAAAGCAATTTAAATTTTTGAAGAAGAGAGAGAGGAAATCAAATAATGTAGATGGTGCAGATTCTGGAGAGCAAAATGACTCTAGACCTGGAATTATGAATGATGATGCTGATAAAGTTGAGCCGAACAGTGGTGAATTATGTAACTCTAATGATTTAGAGAAACTACTTTCTGAAGAAGCATTTTTGCGTCTCAAAGAATCTGGAACTGGTCTTCACATGAAGTCAGTGGATGAGCTTATCAGCATGGCACACAAGTTTTATGATGAAGTTGCCTTGCCAAAGCTGGCCATGGACTTTGGATCACTTGAACTTTCTCCAGTGGATGGGCGAACATTGACTGACTTTATGCATTTAAGAGGATTACAGATGCGATCTTTGGGTCAAGTGGTTAAACTTGCGGAGAATCTTCCTCATATACAATCCCTTTGTATTCATGAGATGATTACTCGAGCTTTCAAGCATCAACTTAAAGCAGTTATTGCCTCTGTTGACAATGTAACTGATCTATCTGCCGCCATTGCATCAACCCTAAATTTCTTACTTGGTGGGTGTCGAACAGAAGATACTGATCAAAGTTTGAATGATGATCATAATCTCAGAATTCAATGGCTACGAATGTTTTTGTCCCAAAGATTTGGGTGGACATTGAATGATGAATTTCAACATTTGAGAAAGTTGTCGATTCTCAGAGGGCTATGTCACAAGGTTGGATTGGAATTATTCCCTAGAGATTATGACATGGAGTCTAGTAAGCCCTTTGGGAAAAATGATATTATCAGCTTGGTTCCTGTTTGCAAGCATGTAGGGTGCTCCTCAATTGATGGACGCAATTTATTGGAGTCTTCAAAAATTGCTCTTGATAAAGGAAAGCTTGAGGATGCTGTAAATTATGGAACAAAGGCATTGGCTAAAATGATGGTTGTTTGTGGACCCTATCATCGAAATACTGCAAGTGCATATAGTCTTCTAGCTGTGGTTCTCTACCACACAGGAGATTTTAACCAGGCCACCGTTTATCAGCAAAAGGCCTTGGATATAAATGAGAGGGAGCTTGGTCTTGACCACCCTGACACTATGAAAAGCTACGGGGATCTTTCTGTTTTTTATTATCGTTTGCAACACATTGAGCTGGCTCTGAAGTATGTTAATCGTGCTCTATTCCTTCTTCACTTTACATGTGGGCTGTCTCATCCAAACACAGCTGCAACTTATATAAATGTGGCTATGATGGAAGAGGGCATGGGAAATGTTCACGTGGCTCTCAGATACTTGCATGAAGCTCTTAAATGCAACAAAAGATTGTTAGGAGCAGATCATATACAGACTGCCGCAAGCTATCACGCCATAGCTATAGCTCTTTCATTGATGGATGCATTTTCTCTGAGTGTGCAACATGAGCAAACTACACTAAAGATACTTCAAGCAAAGCTTGGATCAGAAGACCTTCGTACACAGGATGCTGCAGCATGGCTTGAATATTTTGAATCAAAAGCCATAGAGCAGCAAGAAGCAGCTAAAAATGGAACTCCAAAGCCTGATGCAACCATAGCAAGTAAAGGTCACCTTAGCGTGTCAGATCTCCTGGATTTTATCAGTCCTGACCCGAAAAGAAATGATGCTCAGAGAAAACAGAGACGTGCAAAGTTGCTCCCAACAAGTGATAACAGTCAAGAACATGAAGATGCAGTAGCTGAGGAGAGCATTGTTTTTTATGACTCAAGAGATGCTCCAAGCATGGTAGAAGGGAATATAGAAGAAACCAATGACACACGTGATTCTCAAGTACCAAAAGAAAATGGTGATTTCACTAGGTACAGGCCAGTAACAAGTGAAGTTGTTTATGAGGCATCATCGGATGAGGGTTGGCAAGAAGCCAATTCAAAAGGGCGATCAGGAAATGCTGCTAACCGCAAGTTTGGACACAAAAAGCGACCTCTTCTATCAAAGCTCAGCATTAATGGCTCTAGTAATCACATTTACAGGGAAAGCAGTTCTAGGAATGAGCTTACTTCACCACCACAAAGAGGAGTTCCTAGAATAATGTCAGACATGTCTTCTCCATCTAGACAACCAAAAGCTCGAATCATAGCTTTGAACGAGGATTCTGTTAATCATCCAACAAAAACTTCTGTGCCAAAAATTTCATCTCCTGCATCTCTAAGTTCCTTGGCTTCAAAGTCTATATCTTACAAAGAAGTAGCTCTGGCTCCACCAGGTACAGTTTTAAAGCCACTGTCGGAAAAGGCTGAGATGGACAAGGTTAATGCCGAAGATGAGATATGCAGCAGTCTAGCTGTGGCATCGACCAACGAAGGTACATGCCAAAGTTCCATAGTTAATACAGTTTCTCAGCATGATGAAACAGAGGAAACTCATGAAACTGAACCTCAACAAGAAAATTCTGCATTGGAAGTTGAGAAGGTTTCCCTTGCTTATGATCAGGAAAAACCTACAGAAACAAATGGCAGTAAGCTTTCAGCTGCGGCCAAACCTTTCAATCCAGGAATGTTGTCCATGTCTCACCATTTAAATTCAGGTTCCTTCACTAGCATATATGATGCAGATGTTAGTCAAGGCTTGCATGTGGAGCCTGTGCTTCCCCCTGCTGTTGCTAGGGTCCCTTGTGGACCTAGATCACCTCTATATTACAGAACCAACTATACTTTCCGCATGAAACATGGTTTTAGTAAAAGCCAAACCCCTATCAGAGAAAGAAGTGGATTTGGATCTCCAAAAATAATGAATCCACATGCGCCTGAGTTTGTTCCTAGAAGTGCTTCCCAGATAGAAGCCAATGATGCCAATTCAAATGTTTCCAATGAGCATAATTCTTTATCTGAGGTAGGCATGGCAGAAAAAAATAAGCTAGATGAAAATTTTGTTGAAATCAAGTCAAGTTCCACAAAAAACAGTATTTCTGAATCTGAGAAGTCCGAGATAGCGAGGCAGATATTGCTTAGTTTTCTAGTGAAATCTGTCAAGGAAAATATTGATTCTGTGGACGAATCTAACGGTAGTAAAGGAAAAGTTGGGATGTTGGAAAATTGTGATGATGAAATAGCTAAGGACAGTGCTGTCATAAATATTAAGTATGGAAATGAAGAAAAGAATAAGACAGTGCCTCATTCCACTGATAGTGAAGAGCAAGAGACATTAGGTGTTAGTGAAAAAAAGAATGGTGATGAAGGGTTCATAGTTGTCTCAAAGAGGAGGAAAAACAGGCAGAAGATCGCAAATGGAGTCACAGAATTGTACAACCAACAGTCCATTTGTGCTTCAGTTCGTTAA 5124 0.4174 MPPRSGKGKSNKAKAEKKKKEEKAAAAPSLVDITVVTPYDTQILLKGISTDKILDVRKLLAVKVETCHFTNYSLSHEAKGHKLNDRVEIATLKPCLLRMVEEDYTEEAQAIAHVRRVLDIVACTTRFGRAKRSLPSPDSRPKKNGKAQHQNKTSLSPPDTPNGESRVGSPSSEAPPSAISDSVGMKAIHPTPKLSDFYEFFSLSHLSPPILQLKRCELKDEDDKRKGDYFLLQVKICNGKVIEVVGSEKGFYTVGKQPLHSHTLVDLLQQLSRAFANAYESLMKAFLERNKFGNLPYGFRANTWLVPPSVAESPSSFPALPAEDENWGGNGGGQGRNGEFDLRPWATDFKILASLPCKTEEERVVRDRKAFLLHNQFVDTSIFKAVAAIRHVMESNSNMKNELNSSPGSVQHEDHVGDLSIIVKRDIQDGNKKHDSKPVESIVHKEDSQKNLIKGLTADESVIVHDISSLAVVVVHHCGYTATVKVVGNVNMRKPKVRDIEIDDQPDGGANALNINSLRLLLHKSGSDSLEGNLSSLSNSDDLDATKSLVRKVVQEGIEKIKEEPSVSKRSIRWELGSCWMQHLQKQETSSDNSSKNKEDGNDVEQAVKGLGKQFKFLKKRERKSNNVDGADSGEQNDSRPGIMNDDADKVEPNSGELCNSNDLEKLLSEEAFLRLKESGTGLHMKSVDELISMAHKFYDEVALPKLAMDFGSLELSPVDGRTLTDFMHLRGLQMRSLGQVVKLAENLPHIQSLCIHEMITRAFKHQLKAVIASVDNVTDLSAAIASTLNFLLGGCRTEDTDQSLNDDHNLRIQWLRMFLSQRFGWTLNDEFQHLRKLSILRGLCHKVGLELFPRDYDMESSKPFGKNDIISLVPVCKHVGCSSIDGRNLLESSKIALDKGKLEDAVNYGTKALAKMMVVCGPYHRNTASAYSLLAVVLYHTGDFNQATVYQQKALDINERELGLDHPDTMKSYGDLSVFYYRLQHIELALKYVNRALFLLHFTCGLSHPNTAATYINVAMMEEGMGNVHVALRYLHEALKCNKRLLGADHIQTAASYHAIAIALSLMDAFSLSVQHEQTTLKILQAKLGSEDLRTQDAAAWLEYFESKAIEQQEAAKNGTPKPDATIASKGHLSVSDLLDFISPDPKRNDAQRKQRRAKLLPTSDNSQEHEDAVAEESIVFYDSRDAPSMVEGNIEETNDTRDSQVPKENGDFTRYRPVTSEVVYEASSDEGWQEANSKGRSGNAANRKFGHKKRPLLSKLSINGSSNHIYRESSSRNELTSPPQRGVPRIMSDMSSPSRQPKARIIALNEDSVNHPTKTSVPKISSPASLSSLASKSISYKEVALAPPGTVLKPLSEKAEMDKVNAEDEICSSLAVASTNEGTCQSSIVNTVSQHDETEETHETEPQQENSALEVEKVSLAYDQEKPTETNGSKLSAAAKPFNPGMLSMSHHLNSGSFTSIYDADVSQGLHVEPVLPPAVARVPCGPRSPLYYRTNYTFRMKHGFSKSQTPIRERSGFGSPKIMNPHAPEFVPRSASQIEANDANSNVSNEHNSLSEVGMAEKNKLDENFVEIKSSSTKNSISESEKSEIARQILLSFLVKSVKENIDSVDESNGSKGKVGMLENCDDEIAKDSAVINIKYGNEEKNKTVPHSTDSEEQETLGVSEKKNGDEGFIVVSKRRKNRQKIANGVTELYNQQSICASVR* 1708
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu10g00643 1707 MobiDBLite consensus disorder prediction 1229 1256 - -
Lapu10g00643 1707 SUPERFAMILY TPR-like 895 1049 IPR011990 GO:0005515
Lapu10g00643 1707 MobiDBLite consensus disorder prediction 1140 1174 - -
Lapu10g00643 1707 ProSiteProfiles Clueless (Clu) domain profile. 323 595 IPR025697 -
Lapu10g00643 1707 Gene3D Tetratricopeptide repeat domain 890 1002 IPR011990 GO:0005515
Lapu10g00643 1707 ProSiteProfiles TPR repeat profile. 929 962 IPR019734 GO:0005515
Lapu10g00643 1707 MobiDBLite consensus disorder prediction 1 24 - -
Lapu10g00643 1707 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT EIF-3 7 1423 IPR027523 GO:0006996
Lapu10g00643 1707 Pfam Tetratricopeptide repeat 1012 1086 - -
Lapu10g00643 1707 Pfam Tetratricopeptide repeat 928 998 - -
Lapu10g00643 1707 MobiDBLite consensus disorder prediction 148 178 - -
Lapu10g00643 1707 FunFam Tetratricopeptide repeat (TPR)-like superfamily protein 884 1134 - -
Lapu10g00643 1707 MobiDBLite consensus disorder prediction 1646 1667 - -
Lapu10g00643 1707 MobiDBLite consensus disorder prediction 1394 1414 - -
Lapu10g00643 1707 Pfam Translation initiation factor eIF3 subunit 135 716 858 IPR033646 -
Lapu10g00643 1707 MobiDBLite consensus disorder prediction 622 657 - -
Lapu10g00643 1707 MobiDBLite consensus disorder prediction 130 184 - -
Lapu10g00643 1707 MobiDBLite consensus disorder prediction 1647 1667 - -
Lapu10g00643 1707 SUPERFAMILY Hypothetical protein c14orf129, hspc210 225 292 IPR023231 -
Lapu10g00643 1707 MobiDBLite consensus disorder prediction 1397 1412 - -
Lapu10g00643 1707 MobiDBLite consensus disorder prediction 1269 1299 - -
Lapu10g00643 1707 MobiDBLite consensus disorder prediction 1269 1284 - -
Lapu10g00643 1707 Gene3D Tetratricopeptide repeat domain 1003 1121 IPR011990 GO:0005515
Lapu10g00643 1707 CDD CLU-central 718 859 IPR033646 -
Lapu10g00643 1707 Pfam Mitochondrial function, CLU-N-term 50 121 IPR028275 -
Lapu10g00643 1707 MobiDBLite consensus disorder prediction 1144 1174 - -
Lapu10g00643 1707 SMART tpr_5 929 962 IPR019734 GO:0005515
Lapu10g00643 1707 SMART tpr_5 971 1004 IPR019734 GO:0005515
Lapu10g00643 1707 SMART tpr_5 1013 1046 IPR019734 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu10g00643 Lapu-Chr10 8451050 8462397 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu10g00643 K03255 - gmx:100784276 2858.17
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu10g00643 10 8451050 8462397 Lapu10g00643 10 8451050 8462397 ECH