Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu10g00640 ATGGAGCTTGATGCTCATGTTACCCCGGATAACAAGCGAATGAGAAAAAAGTCTATGGTGTGGGAATACTTCACAGTAGAAGCTGTTGGAGCTGGATGTACCAGGGCTTACTGTAACCAATGCAAAAAATCATTTTCTTATATAACTGATTCAAAACTAGCTGGTACAAGCCATCTGAAAAGACACATTTCTTTGGGAATCTGTCAAGTACTTCGGGAGAAAAATCAACAAAGCTCATATCCCAAAACAGGTGGTTCTCAATATACTCCCAATCCACCCAAGAAACGGCCAAGAGAAAATTCTAGGTTTACTGGTAATGGTATTTCATTTGATCAGGAGCGTTGCAACCATGATATTGCCAAAATGATAATTTTACATGATTATCCTCTTGATATTGTGAAGCAACAGGGTTTCATTGATTTTGTGCGGATTCTTCAACCCCAGTTCAATCCATCACGTCTCAATGCTGTTGAAGGGGATTGTGTTGCTATTTACCTACGGAAAAAGCAAAATCTGTTGAATGTTATTAATGTGATTCCTGGACAAGTCAACCTAACATTGGAATTCTGGACTTCGAACCAGGCAATGGGCTATGTTTTTGTTCGAGGACACTTCATTGATAGTGATTGGAACATACATCGTCCTATCCTCAATGTTGTTACAGTACCATTTCCTGGTTCTGAAGACTCTTTAAATCAAACTTTGTTGACATGCTTATCTGATTGGCATTTGGAGGGTCGGCTGTTTACCCTTGCCCTTGATAAATCCTTTTCCAGTGAGAATGTGATGGAAAATCTGAGAGGCCTACTCTCTGTTAAGAACCCTGCCATACTGAATGGTCAGTTGTTAAACCAAAATTGCTATGCTCGTGTGCTTAGTCGCCTTGCAGCTGATGCTCTGTGGGCAATGAGAGAAAGCATTAGCAAGGTTCGCGATAGTGTAAAGCATGTGAAGTCTTCCGAATCCCACAAAGAGAAGTTTATTGACTTGAAGCAACAATTACAAGTACCTAGTATGGTGAATCTTTCAATGGATGATCCGTGTAAGTGGGACACAACTTATCATATGCTTGTAGCTGCCTGTGAATTAAAGGAAATCTTCATCTGCCTTGATACTACTGATCCTGATTACAGAATGACTCTAACAGTGGATGACTGGAAGCGGGTCGAAACTCTCTGCACATATTTGAAGTATTTGTATGACGCAGCCAAAATTCTGACTCGGCAACCATACCCCACTTCAAACTTATTTTTTGCTGAAGTGTCAAAAGTTCAGGTGGAGCTGACACAAGCAGCCTTCATCCAGGATCCTTTCATAAGAAGTTTTATTTTGCCTTTGCACGAGAACTTTGATCAATATTGGAGAGAAAGCTGCATCATCTTGGCAATTGCAGTAGCTATGGACCCAAGGCATAAAATGAAACTTGTGGAATTTACCTTTGCTAAGACATTTGGTGAGAATGCTGCGGTATGGATAAAGATAGTTGAGGATGGTCTTCGTGATCTATTCATTGAATACAGCACCCAAATGTTTCTTACAGAAACAAATGGTGATGATGGGGATGACATTATGATAAAAGAAACATGCCTAGAAGGGTCTATTGACTGCTCACTTTTTATTGATGGGGATGGACTTTCCGATTATGAATTTTATATATCTGATTTTACCGGCAACCCGCAATTTAAGTCAGAATTGGACGAGTACCTGGAAGAGCCTCTCCTTAACAGAGTAGAGGAATTTGATATTCTGAACTGGTGGAGAATAAATGGATTGAAATACCCGACATTGTCTAGAATCGCATCTGATATTTTGTCTTTACCAGTTTCCACTCTGTCTGCAGATTCCGTTTTTGACACCCAGATTAGAAAAATGGATAGCTACCGTAGTTCTTTAAGCTCCCTCACTCTGGAGGCCCTCATTTGTGCCAAGGATTGGTTCCAGTCAGAATGA 1950 0.4036 MELDAHVTPDNKRMRKKSMVWEYFTVEAVGAGCTRAYCNQCKKSFSYITDSKLAGTSHLKRHISLGICQVLREKNQQSSYPKTGGSQYTPNPPKKRPRENSRFTGNGISFDQERCNHDIAKMIILHDYPLDIVKQQGFIDFVRILQPQFNPSRLNAVEGDCVAIYLRKKQNLLNVINVIPGQVNLTLEFWTSNQAMGYVFVRGHFIDSDWNIHRPILNVVTVPFPGSEDSLNQTLLTCLSDWHLEGRLFTLALDKSFSSENVMENLRGLLSVKNPAILNGQLLNQNCYARVLSRLAADALWAMRESISKVRDSVKHVKSSESHKEKFIDLKQQLQVPSMVNLSMDDPCKWDTTYHMLVAACELKEIFICLDTTDPDYRMTLTVDDWKRVETLCTYLKYLYDAAKILTRQPYPTSNLFFAEVSKVQVELTQAAFIQDPFIRSFILPLHENFDQYWRESCIILAIAVAMDPRHKMKLVEFTFAKTFGENAAVWIKIVEDGLRDLFIEYSTQMFLTETNGDDGDDIMIKETCLEGSIDCSLFIDGDGLSDYEFYISDFTGNPQFKSELDEYLEEPLLNRVEEFDILNWWRINGLKYPTLSRIASDILSLPVSTLSADSVFDTQIRKMDSYRSSLSSLTLEALICAKDWFQSE* 650
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu10g00640 649 SMART bed5 15 71 - -
Lapu10g00640 649 MobiDBLite consensus disorder prediction 75 107 - -
Lapu10g00640 649 Pfam Domain of unknown function (DUF4413) 409 506 IPR025525 GO:0003677
Lapu10g00640 649 PANTHER BED FINGER-RELATED 159 648 IPR045259 -
Lapu10g00640 649 Pfam hAT family C-terminal dimerisation region 564 646 IPR008906 GO:0046983
Lapu10g00640 649 MobiDBLite consensus disorder prediction 75 94 - -
Lapu10g00640 649 ProSiteProfiles Zinc finger BED-type profile. 15 75 IPR003656 GO:0003677
Lapu10g00640 649 SUPERFAMILY beta-beta-alpha zinc fingers 18 72 IPR036236 -
Lapu10g00640 649 SUPERFAMILY Ribonuclease H-like 180 647 IPR012337 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu10g00640 Lapu-Chr10 8429824 8435492 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu10g00640 - - vun:114166194 1215.68
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu10g00640 10 8429824 8435492 Lapu10g00640 10 8429824 8435492 ECH