LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lapu10g00633	ATGGCTCTCATCACCACCCAACCTAAAAACCCCATTTTCCGTCGCTGCACCACCCTTCACCGCTCAATTCCACGGCAGGATAATAGCACTGTTCTTGGTCTTGGCTCCATTAAAAACTTTAACTTTAACCAAAAGCAAAGCAAAATTTCCCTTAAAAATAACCCCTTTACCTATAACGTGGCAGTGACAGCCAAAGCCAAGGCCAATGCAGCATTTGTAGAAGGTTTGGAGGCAGATGAGGGGTCATTGAAACACAGAAGGATTTTGTTGTCTGAAGTTGAGGTGAAGAGAGAGAGGAGTGTTTTCTTTGGGAGGAAATGGAACTCTTTGGATGTTGGCACTGCTGGAATTGTGTTGGCCATGCATGTGCTTTGTCTCTTTGCTCCATTCCATCTCAATTGGCAAGCTTTTTGGGTGGCTGTGGCTCTCTATGTTGTCACTGGCCTTTTTGGCATCACTCTTTCTTTCCACAGGAACCTTTCTCATAGGAGTTTCAAGCTTCCCAAATGGCTTGAATATTTCTTTGCCTATTGTGGGGTTTTGGCACTTCAGGGGAACCCAATTGATTGGGTTAGCACGCATAGATACCATCACCAGTTTTGTGATTCTGAGAGAGACCCTCATAGCCCCACTGAAGGGTTCTGGTTCAGCCATATGAGCTGGCTCTTTGATACCAATTCTGTCATAGAAAGGTGTGGAGAGCCAAACAATGTTGGTGATTTAGAGAAACAACCTTTTTATAGATTTCTCCGAAGCACTTACCTTGTCCACCCTTTTGCTTTGGGCGCCCTTCTATATGCAGCAGGAGGATTTCCTTTCCTTGTTTGGGGAATGGGAGTGAGGATTGTTTGGGTTTATCACATAACCTGGTTTGTAAACTCAGCTTGCCATGTATGGGGGAATCAGGCCTGGAACACCAGGGACTTGTCCAGAAATAATTGGTGGGTGGCGTTGCTTGCATTTGGTGAAGGTTGGCACAATAACCACCATGCTTTTGAGTATTCAGCTCGACATGGACTAGAGTGGTGGCAACTAGACATGACTTGGTACGTTGTGAGATTTCTCCAAGCTATTGGGTTGGCCACTGAAGTCAAGTTACCCACCGAGAGTCACAAGCAGAGAATGGCATTCAATAGTGATACAATAACCACATGA	1155	0.4528	MALITTQPKNPIFRRCTTLHRSIPRQDNSTVLGLGSIKNFNFNQKQSKISLKNNPFTYNVAVTAKAKANAAFVEGLEADEGSLKHRRILLSEVEVKRERSVFFGRKWNSLDVGTAGIVLAMHVLCLFAPFHLNWQAFWVAVALYVVTGLFGITLSFHRNLSHRSFKLPKWLEYFFAYCGVLALQGNPIDWVSTHRYHHQFCDSERDPHSPTEGFWFSHMSWLFDTNSVIERCGEPNNVGDLEKQPFYRFLRSTYLVHPFALGALLYAAGGFPFLVWGMGVRIVWVYHITWFVNSACHVWGNQAWNTRDLSRNNWWVALLAFGEGWHNNHHAFEYSARHGLEWWQLDMTWYVVRFLQAIGLATEVKLPTESHKQRMAFNSDTITT*	385

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lapu10g00633	384	PRINTS	Fatty acid desaturase family 1 signature	157	177	IPR015876	GO:0016717
	Lapu10g00633	384	PRINTS	Fatty acid desaturase family 1 signature	194	223	IPR015876	GO:0016717
	Lapu10g00633	384	PRINTS	Fatty acid desaturase family 1 signature	279	300	IPR015876	GO:0016717
	Lapu10g00633	384	PRINTS	Fatty acid desaturase family 1 signature	322	336	IPR015876	GO:0016717
	Lapu10g00633	384	CDD	Delta9-FADS-like	133	365	IPR015876	GO:0016717
	Lapu10g00633	384	PANTHER	ACYL-COA DESATURASE	84	374	IPR015876	GO:0016717
	Lapu10g00633	384	Pfam	Fatty acid desaturase	137	353	IPR005804	GO:0006629

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lapu10g00633	1	380	Lipid Metabolism Gene Families	AT3G15850	65.617	0.0	505

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Lapu10g00633	K20416		-	gmx:100786391	706.057

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Lapu10g00633	10	8392968	8395207	Lapu10g00633	10	8392968	8395207	ECH