Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu10g00629 ATGGTACTGCCTTTATATATGATTCCCTCTTTGTTACCATGCACAAATGTTGTTTCGGGGGATAAAATATTTACTGGAACATATGGAGTAAACTATGGTAGGATTGCAGACAATCTACCTTCTCCACATAGCGTGGTTACCCTTCTGAAGGCTGCGAAGATTAGGAACATCAGAATATATGATGCTGATCATCAAGTCCTGAGTGCCTTCAAAGGTTCAGGGATTGGAATTATTATTGGGCTACCAAATGAGTTTCTGAGAGACATAAGTCAGGGGGAGGATCGTGCCATGAATTGGATCAAAGAAAATGTTCAGCCATTTCTTCCAGGAACCAGAATTCGTGGCATTGCAGTGGGGAATGAAATATTAGGAGGAGGAGACATGGGACTGTGGGAAGTTTTGCTGCCAGCAGCTAAAAATGTGTACACTGCCCTAGATAGGCTCAATTTGGCACATCAAATTCAGGTGTCAAGTCCACATTCTGAGGCTGTGTTCGCAAATTCCTACCCACCATCAGCATGCACTTTTAGGGATGATGTGCTCCCTTTCATGAAGCCCCTATTGCAATTCTTCTCACAAATTGGCACTCCTTTCTACATAAACGCATACCCCTTCTTGGCCTATAAGAATGACCCCCAACACATTGACATAAACTATGCTCTCTTCAAGAAAAATCCAGGGATTTATGATGCCAAGACTAAACTGCACTATGACAACATGTTTATGGCCCAAATTGATGCAGCTTATGCAGCCTTGGAGAAGGTTGGGTTTGACAAGATGGAGGTCATTGTTTCTGAGACTGGTTGGGCCTCTCGTGGGGATGACAATGAAGCTGGTGCAACAGTAAAAAATGCAAAGACTTACAATAAAAACTTGAAAAAGCTATTGCTCAAGAAAAAGGGTACTCCTTATAGGCCTAAGATGGTTGTGAGGGCTTATATTTTTGCTTTGTTTAATGAGAATTTGAAGCCTGGCCCAACGTCAGAGAGAAACTTTGGATTGTTCAAACCAGATGGCAGCATTGCATATGATATAGGCTTCACTGGACTCACTTCCTCAGCCACCTCCTCTTTTCTTTCCTTCAAGGGTGTTGAATCTTTATATGTGATGGTTTCTACAAGTTGTGCTGCTTTTCTTCTTCTTGTAGCATTATAA 1155 0.4199 MVLPLYMIPSLLPCTNVVSGDKIFTGTYGVNYGRIADNLPSPHSVVTLLKAAKIRNIRIYDADHQVLSAFKGSGIGIIIGLPNEFLRDISQGEDRAMNWIKENVQPFLPGTRIRGIAVGNEILGGGDMGLWEVLLPAAKNVYTALDRLNLAHQIQVSSPHSEAVFANSYPPSACTFRDDVLPFMKPLLQFFSQIGTPFYINAYPFLAYKNDPQHIDINYALFKKNPGIYDAKTKLHYDNMFMAQIDAAYAALEKVGFDKMEVIVSETGWASRGDDNEAGATVKNAKTYNKNLKKLLLKKKGTPYRPKMVVRAYIFALFNENLKPGPTSERNFGLFKPDGSIAYDIGFTGLTSSATSSFLSFKGVESLYVMVSTSCAAFLLLVAL* 385
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu10g00629 384 SUPERFAMILY (Trans)glycosidases 28 346 IPR017853 -
Lapu10g00629 384 Gene3D Glycosidases 27 352 - -
Lapu10g00629 384 FunFam Glucan endo-1,3-beta-glucosidase 14 26 353 - -
Lapu10g00629 384 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE BG1-RELATED-RELATED 28 358 IPR044965 GO:0004553|GO:0005975
Lapu10g00629 384 Pfam Glycosyl hydrolases family 17 29 347 IPR000490 GO:0004553|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu10g00629 Lapu-Chr10 8369337 8370776 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu10g00629 24 358 Glycoside Hydrolase AT3G15800 77.083 0.0 544
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu10g00629 - - vra:106773873 666.381
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu10g00629 10 8369337 8370776 Lapu10g00629 10 8369337 8370776 ECH