Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu10g00616 ATGGTCGTTTTCTCTGTAAAACCTTTCTTCAGTGTTCTCGTCGTCTCGCTCTCGCTCCTCTTCCTTCTCGCACTGCTATCGCCTCCTTCCCTTTTCTCCCAAAATCCCATTTCTGGATTGGTATTGTGCAGTGGGGAGGTGGTGGATATATGGAATGTTCGGAGACTCGTGGAATGGAGACCTTGCAAATGGTGGCTACAAGGCCATCAAACAGCTCTACCACTAGAAACCAACGGATATATTAGAGTGGATTGCTATGGGGGCCTCAATCAGATGCGAAGAGATTTCTGTGACGGTGTGGGTATTGCTCGTCTGTTAAATGCAACCCTCATCTTGCCAAAGTTTGAAGTGGCGTCATATTGGAATGAAACAAGGCAATTTACCTTTCCATTTCTCTGGAATACCTTGCAAATTTTTACTCGAAATTGTATTCATTGCGGTTTTGCAGATGTATATGATGTAGACTACTTTATACAGCATATGAATGGCTTTGTCAAAGTTGTGAAAGAGTTACCACCAGATGTTGCATCAAAAGAACCTGTCCGAGTGGACTGTAGCAAACGGAAAGGGCAATTTGATTACGTTGAAAGTGTTCTTCCATCTTTGTTAAAACACAAGTACATTTCAATCACACCAGCAATGTCCCAAAGAAGGGACAGATACCCTTTGTATGCAAAAGCTGCTCTCTGTCAAGCTTGTTACAAAGCATTGCGTCTTTCCAGATCCTTGGAAATGAAAGCCTCTCAGCTTCTGGATGCAATACCTAAACCCTTTTTGTCTCTTCATCTTCGTTTTGAGCCTGATATGGTTGCGTACAGCCAGTGCGAGTACACGGGCCTTTCTCCTGCTTCCACGAGAGCCATAGAGGCAGCACAAGTGGACAGAAAACCATGGACTGGAGACTTGGCCCGTGTTTGGAGACTACGTGGAAAATGTCCACTTACACCTAACGAGACAGCTTTAATACTTGAATCTCTTTCCATCCCTCCGACTACAAATATATACCTAGCAGCTGGCGATGGTTTGATGGAAATTGAAGGACTGACACAAACCTATGCCAACATAGTTACTAAGTCGAGTCTTCTTAGTAGGGAAGACTTCACAAACATGCATGGCAATACAAAAGCTGCATTGGATTACTATGTATCTATTAACAGTGATTCTTATGTAGCTACATATTTTGGGAACATGGATAAGATGGTTGCAGCAATGAGAGCTTTCAAAGGTTTGTACAAGACTCTATTTTTGAGCAGAAGAGGCTTTGCAGAATTAACCTCAAAGGGTGTTAGGGGAAAGGAGTTGATGGCAGCATTATGGAAGGTTCACAGAGATGATTTTGCTATGGGAAGAGGCTCTGCTCTGCCCGAGTGTTTCTGCGAATTCAAGCTTTGA 1392 0.4332 MVVFSVKPFFSVLVVSLSLLFLLALLSPPSLFSQNPISGLVLCSGEVVDIWNVRRLVEWRPCKWWLQGHQTALPLETNGYIRVDCYGGLNQMRRDFCDGVGIARLLNATLILPKFEVASYWNETRQFTFPFLWNTLQIFTRNCIHCGFADVYDVDYFIQHMNGFVKVVKELPPDVASKEPVRVDCSKRKGQFDYVESVLPSLLKHKYISITPAMSQRRDRYPLYAKAALCQACYKALRLSRSLEMKASQLLDAIPKPFLSLHLRFEPDMVAYSQCEYTGLSPASTRAIEAAQVDRKPWTGDLARVWRLRGKCPLTPNETALILESLSIPPTTNIYLAAGDGLMEIEGLTQTYANIVTKSSLLSREDFTNMHGNTKAALDYYVSINSDSYVATYFGNMDKMVAAMRAFKGLYKTLFLSRRGFAELTSKGVRGKELMAALWKVHRDDFAMGRGSALPECFCEFKL* 464
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu10g00616 463 CDD O-FucT_plant 80 413 IPR024709 -
Lapu10g00616 463 PIRSF UCP009360 1 131 IPR024709 -
Lapu10g00616 463 PIRSF UCP009360 145 462 IPR024709 -
Lapu10g00616 463 Pfam GDP-fucose protein O-fucosyltransferase 80 407 IPR019378 -
Lapu10g00616 463 PANTHER OS02G0726500 PROTEIN-RELATED 46 448 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu10g00616 Lapu-Chr10 8294919 8298018 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu10g00616 74 433 Miscellaneous Gene Families AT1G22460 33.333 3.64e-55 191
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu10g00616 - - gmx:100801207 751.125
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu10g00616 10 8294919 8298018 Lapu10g00616 10 8294919 8298018 ECH