Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu10g00615 ATGGACGCAATCACGGAAGGAGTGAACAACATCAACATCACAGAAACTTATAAGAAGAATCGCATTCAGGTCTCTAATACCAAGAAGCCTCTCTTCTTCTACGTTAATCTCGCCAAGAGGTACATGCAACAGCATAATGAGGTCGAGCTATCAGCACTGGGAATGGCTATTGCTACAGTGGTTACTGTTGCTGAAATCTTGAAAAACAATGGACTTGCTGTTGAAAAGAAAATCATGACATCAACAGTTGACATCAAAGATGATTCTAGAGGAAGACCCGTCCAGAAGGCCAAGATTGAAATATTACTGGGAAAGACAGCAAACTTTGATGAGTTGATGGCTGCTGCGGCTGCTGCGGCTGCCGAAGATGGTGAAAATGGAGATGCTGAAGAACACACTAGTTAA 405 0.4296 MDAITEGVNNINITETYKKNRIQVSNTKKPLFFYVNLAKRYMQQHNEVELSALGMAIATVVTVAEILKNNGLAVEKKIMTSTVDIKDDSRGRPVQKAKIEILLGKTANFDELMAAAAAAAAEDGENGDAEEHTS* 135
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu10g00615 134 FunFam Uncharacterized protein At2g34160 18 132 - -
Lapu10g00615 134 SUPERFAMILY AlbA-like 19 114 IPR036882 GO:0003676
Lapu10g00615 134 Pfam Alba 20 75 IPR002775 GO:0003676
Lapu10g00615 134 PIRSF UCP030333_Alba 1 134 IPR014560 -
Lapu10g00615 134 PANTHER DNA/RNA-BINDING PROTEIN ALBA 3 1 120 IPR014560 -
Lapu10g00615 134 Gene3D - 18 129 IPR036882 GO:0003676
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu10g00615 Lapu-Chr10 8291725 8294062 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu10g00615 - - gmx:100790121 227.254
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu10g00615 10 8291725 8294062 Lapu10g00615 10 8291725 8294062 ECH