Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu10g00614 ATGAAGGACAACAGTGTGGAAAACCCTTTGCGCCTTCAGTCTGTGAACCATATCTCCCTCATATGCAGATCACTGGAAGAATCAATGGATTTCTACCAGAACGTTCTTGGATTTTTCCCCATTAGGAGGCCTGGTTCTTTTGATTTTGATGGGGCATGGCTATTCGGCTACGGTATTGGAATTCATTTGCTAGAAGCAGAGAACCTAGAAAAATTGCCAAAGAAGAAGGAAATTAACCCAAAGGATAATCATATATCTTTTCAGTGTGAAAGCATGGGGGCAGTGGAGAAGAAGCTGAAGGAGATGGATATTGCTTATGTGCGAGCAACGGTGGAGGAAGGTGGGATCCAAGTGGACCAACTCTTTTTCCACGACCCTGATGGCTTCATGATCGAGATATGCAACTGTGATAGCCTTCCTGTGATTCCCTTAGTTGGTGAAGTGGCGAGACCATGTTCCCTTGTGAATCTTGAGAAAATGCAGAATCAGCAGCAGCTACAAAACATGCTCCAACAACTTTGA 522 0.4425 MKDNSVENPLRLQSVNHISLICRSLEESMDFYQNVLGFFPIRRPGSFDFDGAWLFGYGIGIHLLEAENLEKLPKKKEINPKDNHISFQCESMGAVEKKLKEMDIAYVRATVEEGGIQVDQLFFHDPDGFMIEICNCDSLPVIPLVGEVARPCSLVNLEKMQNQQQLQNMLQQL* 174
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu10g00614 173 SUPERFAMILY Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 8 135 IPR029068 -
Lapu10g00614 173 CDD VOC_like 15 133 - -
Lapu10g00614 173 Pfam Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 15 133 IPR004360 -
Lapu10g00614 173 Coils Coil 156 173 - -
Lapu10g00614 173 ProSiteProfiles Vicinal oxygen chelate (VOC) domain profile. 14 136 IPR037523 -
Lapu10g00614 173 PANTHER - 7 170 - -
Lapu10g00614 173 Gene3D - 3 170 IPR029068 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu10g00614 Lapu-Chr10 8285202 8286820 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu10g00614 - - pvu:PHAVU_010G154400g 319.701
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu10g00614 10 8285202 8286820 Lapu10g00614 10 8285202 8286820 ECH