Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu10g00608 ATGGCGTTATTCTCTGCTACTGCAACCGTTCTTCCTCGAAACCTCGCTTTCGCTTCTTCCGCCAAACACTTCGTCGGTCACTCTCTCCTCCGTTCTTCATCTCCGCGCTTCCTCTCATTCCCCACTCTCAAATCAAACCCTCGCAATCGCCTCGCGGTTTCTCTCCAATCCCCACGCGCCCACGCCAGCGCGTCTCCTTCTTCCTCTGCCACCTTCCATGGCCTCTGCTACGTCGTCGGCGACAACATAGACACTGACCAGATCATCCCCGCGGAATACCTCACCCTCGTCCCTTCCAAGCCCGAAGAGTACGAGAAGCTCGGCTCCTACGCCCTCGTCGGCCTCCCCGCTTCCTACGCCACGCGCTTCATCGACCCCGGCGAGACCAAGACCAAGTATGCCATCGTCATCGGCGGCGCCAACTTCGGCTGCGGCTCCTCCCGCGAACACGCGCCCGTCGCGCTTGGCGCCTCCGGCACTGCCGCTGTGGTCGCGGAGTCGTACGCGCGGATCTTCTTCCGGAACTCGGTGGCCACCGGCGAGATATACCCGCTGGAGTCGGAGAGCCGCCTCTGCGAGGAGTGCCGCACCGGCGATGTTGTCACGATCGAGCTCGGAGAGAGCCGCTTGATCAATCACACAACCGGAAAGGAGTATCGGTTGAAGCCGATCGGCGACGCGGGTCCGGTGATTGAGGCTGGGGGCATCTTTGCCTATGCGAGGAATTCCGGCATGATTCCCTCTCGTTGA 750 0.616 MALFSATATVLPRNLAFASSAKHFVGHSLLRSSSPRFLSFPTLKSNPRNRLAVSLQSPRAHASASPSSSATFHGLCYVVGDNIDTDQIIPAEYLTLVPSKPEEYEKLGSYALVGLPASYATRFIDPGETKTKYAIVIGGANFGCGSSREHAPVALGASGTAAVVAESYARIFFRNSVATGEIYPLESESRLCEECRTGDVVTIELGESRLINHTTGKEYRLKPIGDAGPVIEAGGIFAYARNSGMIPSR* 250
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu10g00608 249 Gene3D Aconitase, domain 4 69 245 IPR015928 -
Lapu10g00608 249 SUPERFAMILY LeuD/IlvD-like 72 246 - -
Lapu10g00608 249 NCBIfam 3-isopropylmalate dehydratase, small subunit 76 241 IPR011827 GO:0016836
Lapu10g00608 249 PANTHER 3-ISOPROPYLMALATE DEHYDRATASE SMALL SUBUNIT 2-RELATED-RELATED 68 247 - -
Lapu10g00608 249 FunFam Isopropylmalate/citramalate isomerase small subunit 68 245 - -
Lapu10g00608 249 CDD IPMI_Swivel 78 205 IPR033940 -
Lapu10g00608 249 Pfam Aconitase C-terminal domain 133 180 IPR000573 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu10g00608 K01704 - gmx:100809737 413.305