Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu10g00603 ATGTTGCGGAGATTTCTCTCTTCTCACTTCAAAACCCTAGCCGCCGCTTCTTCCTCTTCTTTCACTTCCCGATCTGCTTCCGCCGCCGCCAGATTCCCCGCTCTTTCTCGCGCCTCCCGCTACTTCTCAACTCAATCCGAGGATGCTACTGCGATCAAAAAGAAGGTCGAGGATGTAATGCCTATCGCTACTGGACACGAGCGCGAGGAGCTTCAAGCTGAGCTCGAGGGAAGGAATATTCTTGAAATAGACCATCCCGAAGGTCCATTCGGCACAAAGGAAGCACCTGCCATTGTAAAATCTTACTATGATAAAAGGATAGTTGGATGCCCAGGAGGTGAAGGCGAGGATGAGCACGATGTTGTCTGGTTTTGGCTGGAGAAAGGCAAGCCTCATGAATGCCCTGTGTGCGCACATATTTTTGTGGTGAGTTTAGAATCAATGAATGCCCTGTGTTATTTTTGTGGTGAGTTTAGAATCAATGAATGA 489 0.4847 MLRRFLSSHFKTLAAASSSSFTSRSASAAARFPALSRASRYFSTQSEDATAIKKKVEDVMPIATGHEREELQAELEGRNILEIDHPEGPFGTKEAPAIVKSYYDKRIVGCPGGEGEDEHDVVWFWLEKGKPHECPVCAHIFVVSLESMNALCYFCGEFRINE* 163
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu10g00603 162 CDD Cyt_c_Oxidase_Vb 51 141 IPR002124 GO:0005740|GO:0005751|GO:0006123
Lapu10g00603 162 ProSiteProfiles Cytochrome c oxidase subunit Vb, zinc binding domain profile. 51 150 IPR002124 GO:0005740|GO:0005751|GO:0006123
Lapu10g00603 162 FunFam Cytochrome c oxidase subunit Vb 52 146 - -
Lapu10g00603 162 Gene3D Cytochrome c oxidase, subunit Vb 52 148 IPR036972 GO:0005740|GO:0005751|GO:0006123
Lapu10g00603 162 PANTHER CYTOCHROME C OXIDASE SUBUNIT 5B, MITOCHONDRIAL 1 143 IPR002124 GO:0005740|GO:0005751|GO:0006123
Lapu10g00603 162 Pfam Cytochrome c oxidase subunit Vb 62 143 IPR002124 GO:0005740|GO:0005751|GO:0006123
Lapu10g00603 162 SUPERFAMILY Rubredoxin-like 52 144 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu10g00603 Lapu-Chr10 8220262 8226375 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu10g00603 K02265 - gmx:100780886 243.432
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu10g00603 10 8220262 8226375 Lapu10g00603 10 8220262 8226375 ECH