Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu10g00602 ATGATGGGATCCGGGTCGGGTTCTCTGGTGTGGTTCCGGAAGGGTATTCGGATCCACGACAACCCGGCTCTCGAGTTCGCTTCCCGAGGTGTTTCTCATCTATACCCTGTCTTCGTCATTGACCCGCATTACATGAAACCCGACCCGAATTCTCCCTCACCTGGGTCATCGCGCGCGGGTCTGAACCGCATCCAGTTCTTGCTGGAGAGCCTCTTGGACCTTGATCTCAACCTCAAGAAACTTGGCTCGCGACTTTTGATTCTTAAGGGTAACCCAGCTGAAGTTGTCATTCAATGCTTGAAGGAGTGGAATGTCAACAAGCTGTGCTTTGAGTACGACACTGAACCGTATTATCAGGCTCTGGATGTTAAAGTTAAGAACTTTGCACTTGCTGCTGGAATTGAGGTTTTCTCTCCTGTGAGTCACACACTCTTCAACCCCACGGATATTATACACAAGAACGGAGGGAAGCCGCCCCTTAGTTATCAGTCGTTTGTCAAGCTTGCCGGGGAACCGCCGTCTCCTCTCTCAACCGTGTACTCTTCACTTCCGCCAGTTGGTCATCTTAGAAGTTGTGATATTTCTGAAGTTCCTACCATCACAGATCTTGGATATGGAGATGCTGAACAGGATGAGTTCTCTCCTTTCAAAGGGGGTGAGTCAGAAGCATTGAGGAGGTTGGATGAATGCATGAAAGACAAGAACTGGGTGGCGAACTTCGAGAAACCCAAGGGCAATCCATCTGCATTTCTTAAGCCGGCAACAACTGTTTTATCACCGTACCTGAAATTTGGTTGTCTATCTTCCAGATATTTCTACCAGCGAATTCAGGATATATATAGAAGTATGCCAAAGCATACATCACCTCCTGTTTCTCTTACAGGACAGTTGTTGTGGCGAGACTTCTTTTACACGGCTGCTTTTGGGACTCCAAATTTTGATAGAATGAAAGGCAATAGGATATGCAAGCAGATTCCTTGGAAGGATGATGATAAACTGCTGGAGGCTTGGAGGGAGGCTAGGACAGGATTTCCTTGGATTGATGCTATCATGATCCAGCTACGCAAATGGGGTTGGATGCATCATTTGGCACGGCATTCTGTTGCATGTTTTCTAACTCGAGGCGATCTGTTTGTTCATTGGGAAAAAGGACGGGATGTCTTTGAGAGGCTTCTGATTGATTCAGATTGGGCAATTAATAACGGAAACTGGATGTGGCTTTCTTGTTCATCTTTCTTTTATCAGTACAATCGTATTTATTCCCCAACCACATTTGGTAAGAAGTATGACCCTAATGGCGACTATATTAGGCATTTTCTCCCAGTTTTAAAAGATATGCCCAGGGAGTACATTTATGAACCCTGGACGGCTCCTAAAAGCATTCAAACCAAAGCAAAATGCATAATTGGCAAAGACTACCCAATGCCAGTTGTTTCTCATGATTCAGCGAGCAAAGAGTGCCGAAGGAAAATGGGGGAGGCATATGCATTGAATAAAGAATTGAATGGTTTGGTTAGTGAAGATGATCTGAAAAACTTGAGTAGGAAATTAGATGAGAGTGAAAGAAAAGAGCCTGGAGCTAAAAGATATAAGCAACAGCTGATTGGCTGA 1611 0.4507 MMGSGSGSLVWFRKGIRIHDNPALEFASRGVSHLYPVFVIDPHYMKPDPNSPSPGSSRAGLNRIQFLLESLLDLDLNLKKLGSRLLILKGNPAEVVIQCLKEWNVNKLCFEYDTEPYYQALDVKVKNFALAAGIEVFSPVSHTLFNPTDIIHKNGGKPPLSYQSFVKLAGEPPSPLSTVYSSLPPVGHLRSCDISEVPTITDLGYGDAEQDEFSPFKGGESEALRRLDECMKDKNWVANFEKPKGNPSAFLKPATTVLSPYLKFGCLSSRYFYQRIQDIYRSMPKHTSPPVSLTGQLLWRDFFYTAAFGTPNFDRMKGNRICKQIPWKDDDKLLEAWREARTGFPWIDAIMIQLRKWGWMHHLARHSVACFLTRGDLFVHWEKGRDVFERLLIDSDWAINNGNWMWLSCSSFFYQYNRIYSPTTFGKKYDPNGDYIRHFLPVLKDMPREYIYEPWTAPKSIQTKAKCIIGKDYPMPVVSHDSASKECRRKMGEAYALNKELNGLVSEDDLKNLSRKLDESERKEPGAKRYKQQLIG* 537
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu10g00602 536 MobiDBLite consensus disorder prediction 516 536 - -
Lapu10g00602 536 SUPERFAMILY Cryptochrome/photolyase FAD-binding domain 208 497 IPR036134 -
Lapu10g00602 536 Gene3D DNA Cyclobutane Dipyrimidine Photolyase, subunit A, domain 3 311 535 - -
Lapu10g00602 536 Gene3D - 142 304 - -
Lapu10g00602 536 PANTHER CRYPTOCHROME 8 498 IPR002081 -
Lapu10g00602 536 FunFam Cryptochrome-1 311 531 - -
Lapu10g00602 536 SUPERFAMILY Cryptochrome/photolyase, N-terminal domain 7 188 IPR036155 -
Lapu10g00602 536 Gene3D HUPs 9 218 IPR014729 -
Lapu10g00602 536 ProSiteProfiles Photolyase/cryptochrome alpha/beta domain profile. 6 144 IPR006050 -
Lapu10g00602 536 Pfam DNA photolyase 8 168 IPR006050 -
Lapu10g00602 536 Pfam FAD binding domain of DNA photolyase 295 491 IPR005101 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu10g00602 Lapu-Chr10 8214165 8219040 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu10g00602 K02295 - gmx:100780347 1038.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu10g00602 10 8214165 8219040 Lapu10g00602 10 8214165 8219040 ECH