Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu10g00598 ATGCCCGAGACAGCTACTACACCTACCGATTCCTCCTCTACTAGTCTATTTGAGCTTCTCACCGAAATGAAGAAGCAATCTTGTCCAGAGTCACTCGCCTTACAAGCAAAATCTCCCTCTCAATACTCCTCCGAATGCTGGTTCGACGATGCATGTATCTTGGACATGGATTACTTCGTGAAGACCCTTTCTGGCATCAAGGCCAAAGGTGTTCGTGCAGACCTTATTGGCTCCATCATCACACACTATGCCTCCAAATGGCTCCCTGACCTTTCTGCAGGACCACTTAATAATTTGTTTTCTATAGGTGATATGGTCGAAAAGGGTCTCACCCAAATCGAGGAATCACCGGAAAGCGTGACGGCTTCATGGATGAAGAAGAGGTTCTTCGTGGAAACCTTAGTGGGTGTTCTGCCTCCTGAGAAAGATGCAATTCCATGCAACTTTCTGCTTAGGCTTCTGAGAACGGCAAACATGGTTGGGATTGAGGGTACCTACAGGCAAGAGCTTGAGAAGCGAATTTCGTGGCAGTTGGACCAGGCTTCGTTGAAGGAGTTGGTGATTCCATCTTTCAGCCACACTTGTGGGACTCTCTTGGATGTTGAGCTTGTCATCAGGCTGGTTCAGAGGTTTGTGAGTTTGGACAGTGAGGGAGCTAAGAGCGTTGCCTCTTTGGTTAAGGTGGCTAAGTTAGTTGATTCCTACCTCGCTGAGGCTGCTGTAGACACCAATTTGAGCTTGAACGACTTCGTTACCCTTGCCGCTGCTCTTCCTAGCCATGCAAGAGCAACGGATGATGGCTTGTACCGAGCCATTGATACTTATCTTAAAGCACATCCAGGAGTGTCAAAGCAAGAAAGGAAGGGTCTGTGCAGGTTAATTGACAGCAGAAAACTGACCCCAGAGGCATCACTTCACGCGGCACAAAACGAAAGGTTTCCAGTGAGAGCAGTGATTCAGGTGCTGCTTTCTGAGCAAAGCAAACTGACACGCCACGTGGATTGGAGCGGTTCGCTGGTGAGTGGAACAAGAAGCCCTAGTGTGTTGGACTTACCGACACGGTGTCTCTCGAAGCGCGAGGTGAACGCGCAACAGCACGAGATAAGGAAGCTGAAGGACGACGTGTACAGGTTGCAGAGCCAGTGCAACGCCATGCAGGCACAAATGGAGAGAATGGTGGAGAAGAAGAAGGGCTTCTTCAAGTGGAAGAAGTTTGCTTTTGGCAAAGCTGAACATGAAAAAATGGAACAAGAGCTTGAAGGGAACGGAATGTACACTCCTGCAGGCCTGAAAACCAGATTGGTGAATGTGAAAGGTAGTAAGAACAACAATGCTCACAAGTGGAGAAAGTCCATGTCGTGA 1362 0.486 MPETATTPTDSSSTSLFELLTEMKKQSCPESLALQAKSPSQYSSECWFDDACILDMDYFVKTLSGIKAKGVRADLIGSIITHYASKWLPDLSAGPLNNLFSIGDMVEKGLTQIEESPESVTASWMKKRFFVETLVGVLPPEKDAIPCNFLLRLLRTANMVGIEGTYRQELEKRISWQLDQASLKELVIPSFSHTCGTLLDVELVIRLVQRFVSLDSEGAKSVASLVKVAKLVDSYLAEAAVDTNLSLNDFVTLAAALPSHARATDDGLYRAIDTYLKAHPGVSKQERKGLCRLIDSRKLTPEASLHAAQNERFPVRAVIQVLLSEQSKLTRHVDWSGSLVSGTRSPSVLDLPTRCLSKREVNAQQHEIRKLKDDVYRLQSQCNAMQAQMERMVEKKKGFFKWKKFAFGKAEHEKMEQELEGNGMYTPAGLKTRLVNVKGSKNNNAHKWRKSMS* 454
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu10g00598 453 PANTHER OS12G0117600 PROTEIN 26 412 IPR043454 -
Lapu10g00598 453 Coils Coil 361 388 - -
Lapu10g00598 453 Pfam NPH3 family 46 304 IPR027356 -
Lapu10g00598 453 ProSiteProfiles NPH3 domain profile. 45 328 IPR027356 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu10g00598 Lapu-Chr10 8186134 8188542 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu10g00598 44 397 EF-hand Containing Proteins AT3G44820 33.158 7.85e-54 189
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu10g00598 - - gmx:100793820 782.326
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu10g00598 10 8186134 8188542 Lapu10g00598 10 8186134 8188542 ECH