Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu10g00592 ATGGGTTCAGAAGACGCTCTAAAGCTTCCAGTAATCGACTTCACTGACCTCAAACTAGAAGGCAACAATTGTAATTGGGAGGAAGTAAAATCCCAAGTCCACAAGGCACTAGTAGAGTATGGTTGCTTTGAAGCAATTTTTGATAGAGTTCCTTTGGAACTTCGGAAAGCCATATTTGGTGCAGTTCAAGAACTCTTTGATCTTCCTCTACAAACAAAGATACTCAATGTGTCTAAGAAGCCCTATCACGGTTATGTTGGGCAATATCCTATGGTTCCACTTTTTGAAAGCATGGGCATTGACGATGCAATTGTCTATGACAAAGTAGAAAGCATGACCAATATCATGTGGCCTAATGGAAACCCAAGTTTTAGCAATACCATACAGTCCTTCTCTGGGCAGCTAGCAGAGTTGGATCAGATCATTAGGAAGATGGTTTTGGAGAGCCTGGGTGTTCAGAAGTACTTGGAAGAGCACATGAACTCAACCAATTATCTCCTCCGGGTTATGAAATACAAAAGTCCTCAAACCAGTGACACAAAGCTAGGCCTCAGCACACACACAGACAAGAACATAGTGACCATATTGTACCAAAACGAAGTGGAGGGTTTAGAGGTGTTGACCAAAGATGGGAAATGGATAAGCTACAAGCCTTCCCCTGACAGTTTTGTTGTCATGATTGGTGACTCTCTCCATGCATGGTCAAATGGTAGATTGCATTCACCCTTTCACCGAGTGATGATGAGTGGAAATGAGGCAAGATACTCTGCAGGGTTGTTCTCTGTCCCTAAAGGAGGGAGCATAATAAAAGCCCCAGAGGAGCTGGTGGATGAGGAACACCCTCTGCTTTTTAAACCCTTTGATCATGTTGAGTTCCTCAAGTATTACTACACTGAAAAAGGACAGAGAGATCAGTTTGCACTGCTCACTTACTGTGGTGTTTGA 945 0.4307 MGSEDALKLPVIDFTDLKLEGNNCNWEEVKSQVHKALVEYGCFEAIFDRVPLELRKAIFGAVQELFDLPLQTKILNVSKKPYHGYVGQYPMVPLFESMGIDDAIVYDKVESMTNIMWPNGNPSFSNTIQSFSGQLAELDQIIRKMVLESLGVQKYLEEHMNSTNYLLRVMKYKSPQTSDTKLGLSTHTDKNIVTILYQNEVEGLEVLTKDGKWISYKPSPDSFVVMIGDSLHAWSNGRLHSPFHRVMMSGNEARYSAGLFSVPKGGSIIKAPEELVDEEHPLLFKPFDHVEFLKYYYTEKGQRDQFALLTYCGV* 315
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu10g00592 314 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 162 263 IPR005123 -
Lapu10g00592 314 FunFam Probable 2-oxoglutarate-dependent dioxygenase AOP1.2 2 301 - -
Lapu10g00592 314 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 9 294 - -
Lapu10g00592 314 Pfam 2OG-Fe(II) oxygenase superfamily 159 260 IPR044861 -
Lapu10g00592 314 Pfam non-haem dioxygenase in morphine synthesis N-terminal 9 87 IPR026992 -
Lapu10g00592 314 Gene3D - 7 310 IPR027443 -
Lapu10g00592 314 SUPERFAMILY Clavaminate synthase-like 5 301 - -
Lapu10g00592 314 PRINTS Isopenicillin N synthase signature 223 249 - -
Lapu10g00592 314 PRINTS Isopenicillin N synthase signature 187 208 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu10g00592 Lapu-Chr10 8149191 8150443 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu10g00592 7 297 Glycosyltransferase AT5G59530 24.252 6.34e-19 84.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu10g00592 - - gmx:100784444 590.497
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu10g00592 10 8149191 8150443 Lapu10g00592 10 8149191 8150443 ECH