Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu10g00575 GACATCGCAGAGCTTCTTAGGATTGGCCATGAATACGATGCATATACAAGGGTTGAAAGGTTTCTGTTAGAGCAGAAAATGTTATCCTGCTATGAACTTATTGAGAAGTTTGTTGGGTGCATATCAGATCATGTTGAAGACTTAACTAAGCAGAAGGATTGCCCTGATGAATGCAAGGAAGCTGTGCCATCATTGATGTATGCTTCTAAAAGATTTGGTGACCTGCCAGAATTGCGTGAGCTCAGAACATTATTCACCGAGAAATATGGGAATTCTCTTAACCCTTATACAAACAAAGAGGAGAAGCCTGTTCTTGGAGAAGACTTCAATATATCAAAAGGAAAAGAAAGAGACATCCAACATCTAGAAAGGAAGGATTTGAATGATGGTTCATGTATGCATCAAAACAGTAGCAGTGATGATGAAACGAGTCTGTCATCCCATGATGGGCGAAAGGGTAGTAGTTCAAGTTCAGTGGGAAGCATATATGAGGATGAAGTTGAAACCAATAGGCCAATTCCTTTCTATTGGCGCATTGCACCTCCATACCTAAAACCAAAGACCAACAAACGTGATTCAAAGAAAACAACTCATGTTAACATTGCAACACCTCCAGATTCAGGTGGAATGAAATCAGGCAGAGAAAAACGTTATCCTTCTCAACAAACAGAAGATGATACTGGGCAAAATAGAAGGTGTACAAGCTCACATATGAGAGGAAAGTCGCTTCCTTCTGAACCCAACACTACGGTGGAAGCATCAAAAGGGCATATACAAACAATTTCCTTAGATTCAGGAATGTGGGGTGGTGTATGGCGTGTGCATCCAAAACTACCC 837 0.4086 DIAELLRIGHEYDAYTRVERFLLEQKMLSCYELIEKFVGCISDHVEDLTKQKDCPDECKEAVPSLMYASKRFGDLPELRELRTLFTEKYGNSLNPYTNKEEKPVLGEDFNISKGKERDIQHLERKDLNDGSCMHQNSSSDDETSLSSHDGRKGSSSSSVGSIYEDEVETNRPIPFYWRIAPPYLKPKTNKRDSKKTTHVNIATPPDSGGMKSGREKRYPSQQTEDDTGQNRRCTSSHMRGKSLPSEPNTTVEASKGHIQTISLDSGMWGGVWRVHPKLP 279
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu10g00575 279 Pfam Regulator of Vps4 activity in the MVB pathway 1 95 IPR005061 GO:0015031
Lapu10g00575 279 MobiDBLite consensus disorder prediction 131 164 - -
Lapu10g00575 279 MobiDBLite consensus disorder prediction 184 253 - -
Lapu10g00575 279 MobiDBLite consensus disorder prediction 101 130 - -
Lapu10g00575 279 MobiDBLite consensus disorder prediction 96 165 - -
Lapu10g00575 279 Gene3D - 1 109 IPR042277 -
Lapu10g00575 279 PANTHER IST1 FAMILY MEMBER 1 95 IPR005061 GO:0015031
Lapu10g00575 279 MobiDBLite consensus disorder prediction 223 253 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu10g00575 Lapu-Chr10 7974060 7976095 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu10g00575 - - pvu:PHAVU_010G150200g 388.652
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu10g00575 10 7974060 7976095 Lapu10g00575 10 7974060 7976095 ECH