Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu10g00569 ATGAACATGCCGCCCAAGCCGAACCAGGTGGTAGTGAGAGACCTCGTCGAGGAAGCCAAGAAACGGATCGTCATCCTCGTTGTATGCGTCGTCGGAATCTCCTATCTCATGTCCTTGACAAGCTCCTCAGTTTGGGTCAACTTGCCAGCTGCAGCCTCCTTGATTATTATTCTCCGTTATTTATCGCTAGATTTTGAAATGAAGAGAAAAGCTGCAGCATACAACAATAAAGCAGGCTCGGTCAATGTTCCGTCTTCAAAGAAGCCTATGGAAAATCCTAAAGCTATTGCAAAGTTTGAGTGGAGAACAAAAGTGAATTCTCCTGTTGTTGAGGATGCAATTGATCACTTCACCCGACATTTAATTTCTGAGTGGGTGACAGATCTTTGGTATTCTCGCTTAACACCAGACAAAGAGGGTCCTGAGGAGTTAGTGCAAATAATTAATGGTGTTCTTGGGGAAATTTCAGGACGCATGAGAAACATAAATTTGATAGATTTTTTAATAAGGGATCTTGTTAATCTTATTTGCACACACTTGGAGCTGTTTCGTGCTGCCCATTCAAAGATTGAAAAACATCATGCAGGTTCATTAACAATTGAAAGCCGAGACATGGAACTAAAAACTGTTTTGGCTGCTGAGAACAAATTGCATCCTGCATTATTTTCTGCAGAAGCTGAACATAAGGTTTTGCAGCATCTGATGACCGGTCTTATGCATGTTACTTTCAAGTCTGAGGATTTGCAGTGTTCTTTCTTTCGATATACTGTCAGGGAGCTTCTTGCGTGTGCTGTAATACGACCTGTCCTAAACTTAGCAAATCCAAGATTTATTAACGAAAGAATTGAATCAGTGGTAGTTAACAGGACCAAGGTTAACAAGGGGGTTGCTGCAGCTCAAGAGGGATCTCACACTAAAGTAGATGAGTTGCAGGTTTCATCTCATGATTTCTCCAAGACTTCAGATCCTTCTGTTACTGGTGTTGAGCTTGTGCAGCTAAAAAATGGTCCATCCAGAAATGCAGAGACATCTGCTGAAAATAATGCCCGTGATAATATCATTAAAGATCCTCTGCTTTCAGTTTCGGTTGATACACGATCTTCCCGTACATGGAGCTCATTGCCTGCAAACCCCACTAGTGATGACCAAAGTATTCAACCACTTCGCTCAGGAGGAGAGTGGGGAGATATTTTAGATGTCATCTCTCGCAGGAAGACCCAAGCTCTTGCTCCAGAACATTTTGAGAATGTGTGGACTAAAGGGAAAAATTACAAGAAAAAGGATGGTGAGAATCAGTCAAATGAGCATGCTTCACAGCATCCTGTGGTAGGGAAACTGCCAAAGGTAGATCACGTAAAAGCAATATCTGGATCCAAACAAAGAGATACTAATTCCAAGCTTATTCCCCCCAAGGGACGCCACATTAATTCTGGACATAGTAGTCATTTATCTGTTGAAAATACATCCACTCATGCAGAAAAGAATGGATCAAGTTCAGTTACCTCATATAAAGACAATGAGTCAGTTACATCATATAAAGACGAGGAGCACATCCACATTTATGGGCAGATAAGTGATTCAGAGAGCAGTACATCTTATACTTCTGAAGATGATGAAAGTAGTACTGTCACTGGCCTTGATACCCCTGTCACTAAGGTTTGGGATGGAAGAAGTAATAGAAACCAGGCAGTGTCTTATGTTCATCACCCACTTGAAAATTTTGACAATCACAGTGCAAAGAAAAGGAATAAGAGCCATTCTCGCTATCCAAGACTATCCAGAGCCCAATCTGGCAATAAAAGGTCTTGGCCAGGTGGTCATAAAATGCAAACATGGCAGGAGGTTGAGAGGACAAGCTTTTTGTCTGGAGATGGTCAAGACATACTTAATTCTTCAAAATCACATATAGATTCTGAGGAGTCCAGTGATGATGCTGATATTGAAAGTTTGGGCAGACTTTATAGTGGAGCAGCAGCCTCTTCTTCTGCCCACTCTATTTCTAAAACAGAATCTTGTAGTTTGTCTGTTACTCCCCTGAAAAGTTCCTCTGCTGTAGATTCCTTTTACAAGTTGAGATGTGAGGTCTTAGGTGCTAATATTGTGAAGAGTGGCTCTAAAACCTTTGCTGTTTACTCCATATCCGTTACAGATATAAATAATAACAGTTGGTCAATTAAAAGAAGGTTTCGTCATTTTGAGGAGCTACATAGACGCCTGAAAGAGTTCCCTGAGTATAATCTTCATTTGCCACCAAAACATTTTCTGTCGACGGGTTTAGATGTACCTGTCATTCAAGAGCGGTGTGAATTACTGGATAAATATTTGAAGAAACTTACGCAACTACCAACAGTTTCGGAATCAATTGAAGTCTGGGACTTTCTCAGTGTTGATTCTCAGACTTACATATTCTCAAATTCTTTTTCTATCATGGAAACATTATCTGCTGGCTTGGATGCCAAACCATTTGAGAAGACTAAAAGCACTTCTCTGTCCTCTGCACCTGCAAGTGATCCTGTGTCCTTTAGAAGAGAAAACTGTAGTGCTGAAAGTAAAGAGTCTGTTATGCGAGCAAAAAATAATGTTGAGTCCAATGGATTGAGGTCAAAAGTAAATAGCACGCCTCTTTCTCTACCAAAAAAGAATACACATCAACCTATAAAGTCATTTGACGATTCTAGCAACAATACAGATATTGTAGCACGGAAGAGTGCACCTTCTCCCAATAACTTGCAAAAGACAGTGAAAGGAAGAGATAGTTCAGATGAGGTTTCTGAAGTGCACCGTGATACTTCCGATACTTTTCCAACAGAGTGGGTGCCGCCAAATTTGAGTGTACCTATATTGGATTTGGTTGATGTTATCTTCCAGGTTCAAGATGGTGGATGGATTAGGAGGAAGGCTTTTTGGGTTGCTAAACAAGTCTTACAACTAGGAATGGGTGACGCATTTGATGACTGGTTGATTGAGAAAATCCAGCTTCTTCGTAAGGGATCAGTGATTGCTTCAGGGGTCAAGCGAGTTGAGCAAATACTCTGGCCTGATGGAATATTCATAACCAAGCACCCAAATAGACGACCACCACCACCACCACCACCCACTAGCCCATCCCAAAATTCTAGTCATGGTAATCAAACTACACAAGTATCTTCTCATAGGTTGGAAGATGAACATCAACAGGAAGCAGATCGGCGTGCAAAATTTTCACCCATCCTTGTTGATGTAGATCATGCACCGCCAGCAATTGTAGGTCTTGTTGGTCGGAAGGAGTATGAACAATGTGCAAGAGATCTATATTTTTTCCTTCAGTCGTAA 3312 0.4118 MNMPPKPNQVVVRDLVEEAKKRIVILVVCVVGISYLMSLTSSSVWVNLPAAASLIIILRYLSLDFEMKRKAAAYNNKAGSVNVPSSKKPMENPKAIAKFEWRTKVNSPVVEDAIDHFTRHLISEWVTDLWYSRLTPDKEGPEELVQIINGVLGEISGRMRNINLIDFLIRDLVNLICTHLELFRAAHSKIEKHHAGSLTIESRDMELKTVLAAENKLHPALFSAEAEHKVLQHLMTGLMHVTFKSEDLQCSFFRYTVRELLACAVIRPVLNLANPRFINERIESVVVNRTKVNKGVAAAQEGSHTKVDELQVSSHDFSKTSDPSVTGVELVQLKNGPSRNAETSAENNARDNIIKDPLLSVSVDTRSSRTWSSLPANPTSDDQSIQPLRSGGEWGDILDVISRRKTQALAPEHFENVWTKGKNYKKKDGENQSNEHASQHPVVGKLPKVDHVKAISGSKQRDTNSKLIPPKGRHINSGHSSHLSVENTSTHAEKNGSSSVTSYKDNESVTSYKDEEHIHIYGQISDSESSTSYTSEDDESSTVTGLDTPVTKVWDGRSNRNQAVSYVHHPLENFDNHSAKKRNKSHSRYPRLSRAQSGNKRSWPGGHKMQTWQEVERTSFLSGDGQDILNSSKSHIDSEESSDDADIESLGRLYSGAAASSSAHSISKTESCSLSVTPLKSSSAVDSFYKLRCEVLGANIVKSGSKTFAVYSISVTDINNNSWSIKRRFRHFEELHRRLKEFPEYNLHLPPKHFLSTGLDVPVIQERCELLDKYLKKLTQLPTVSESIEVWDFLSVDSQTYIFSNSFSIMETLSAGLDAKPFEKTKSTSLSSAPASDPVSFRRENCSAESKESVMRAKNNVESNGLRSKVNSTPLSLPKKNTHQPIKSFDDSSNNTDIVARKSAPSPNNLQKTVKGRDSSDEVSEVHRDTSDTFPTEWVPPNLSVPILDLVDVIFQVQDGGWIRRKAFWVAKQVLQLGMGDAFDDWLIEKIQLLRKGSVIASGVKRVEQILWPDGIFITKHPNRRPPPPPPPTSPSQNSSHGNQTTQVSSHRLEDEHQQEADRRAKFSPILVDVDHAPPAIVGLVGRKEYEQCARDLYFFLQS* 1104
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu10g00569 1103 MobiDBLite consensus disorder prediction 915 932 - -
Lapu10g00569 1103 MobiDBLite consensus disorder prediction 852 914 - -
Lapu10g00569 1103 MobiDBLite consensus disorder prediction 568 609 - -
Lapu10g00569 1103 Gene3D - 689 805 IPR036871 GO:0035091
Lapu10g00569 1103 MobiDBLite consensus disorder prediction 523 556 - -
Lapu10g00569 1103 ProSiteProfiles PXA domain profile. 107 290 IPR003114 -
Lapu10g00569 1103 Pfam PXA domain 107 284 IPR003114 -
Lapu10g00569 1103 MobiDBLite consensus disorder prediction 1022 1036 - -
Lapu10g00569 1103 MobiDBLite consensus disorder prediction 477 507 - -
Lapu10g00569 1103 MobiDBLite consensus disorder prediction 420 510 - -
Lapu10g00569 1103 SUPERFAMILY PX domain 690 798 IPR036871 GO:0035091
Lapu10g00569 1103 SMART PX_2 693 797 IPR001683 GO:0035091
Lapu10g00569 1103 MobiDBLite consensus disorder prediction 420 434 - -
Lapu10g00569 1103 MobiDBLite consensus disorder prediction 367 390 - -
Lapu10g00569 1103 MobiDBLite consensus disorder prediction 367 387 - -
Lapu10g00569 1103 PANTHER PX SERINE/THREONINE KINASE PXK 103 1103 - -
Lapu10g00569 1103 CDD PX_SNX19_like_plant 691 795 - -
Lapu10g00569 1103 MobiDBLite consensus disorder prediction 1018 1060 - -
Lapu10g00569 1103 ProSiteProfiles PX domain profile. 689 801 IPR001683 GO:0035091
Lapu10g00569 1103 MobiDBLite consensus disorder prediction 590 609 - -
Lapu10g00569 1103 MobiDBLite consensus disorder prediction 826 933 - -
Lapu10g00569 1103 Pfam Sorting nexin C terminal 962 1103 IPR013937 -
Lapu10g00569 1103 SMART PXA_3 111 290 IPR003114 -
Lapu10g00569 1103 Pfam PX domain 719 797 IPR001683 GO:0035091
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu10g00569 Lapu-Chr10 7926733 7934203 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu10g00569 K17925 - gmx:100790491 1879.37
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu10g00569 10 7926733 7934203 Lapu10g00569 10 7926733 7934203 ECH