Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu10g00563 ATGGCTTCTCTTGCAACCTTAGCTGCTGCTCAACCAGCTGTGATCAATGGCCTTGCTGGAAGCTCCCTCACTGGAACTAAGCTCTCTTTCAAGCCCTCTCGCCAGAGTCTTAAATCCAAGAACTTCAGGAGTGGTGCTGTGGTAGCAAAGTATGGTGACAAGAGTGTGTACTTTGATTTGGAGGATCTGGGTAACACCACAGGGCAGTGGGACTTGTATGGCTCAGATGCACCTTCACCCTACAATTCTCTTCAGAGCAAGTTCTTTGAGACATTTGCTGCTCCATTCACAAAGAGAGGATTGCTACTCAAGTTTCTGATATTGGGAGGTGGATCCACCCTGGCATACTTCAGTGCAACAGCCTCAGGTGATATTCTACCAATCAAGAAGGGTCCACAACTTCCACCAAAGCTCGGTCCTCGTGGCAAGATCTAA 435 0.4828 MASLATLAAAQPAVINGLAGSSLTGTKLSFKPSRQSLKSKNFRSGAVVAKYGDKSVYFDLEDLGNTTGQWDLYGSDAPSPYNSLQSKFFETFAAPFTKRGLLLKFLILGGGSTLAYFSATASGDILPIKKGPQLPPKLGPRGKI* 145
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu10g00563 144 Gene3D - 98 120 - -
Lapu10g00563 144 PANTHER PHOTOSYSTEM I REACTION CENTER SUBUNIT VI-2, CHLOROPLASTIC 1 144 IPR004928 GO:0009522|GO:0009538|GO:0015979
Lapu10g00563 144 Pfam Photosystem I reaction centre subunit VI 8 144 IPR004928 GO:0009522|GO:0009538|GO:0015979
Lapu10g00563 144 FunFam Photosystem I reaction center subunit VI 98 120 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu10g00563 K02695 - gmx:100499832 239.195
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu10g00563 10 7900160 7903207 Lapu10g00563 10 7900160 7903207 ECH