Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu10g00546 ATGGAATCGAGTCGAAGAGCGGTGGAATCGTACTGGCGATCGCGGTTGATCGATTCAGCTACGTCCGATGAAGATAAAGTCACACCCGTTTACAAATTGGAGGAAATCAGCGAACTTTTGCGTTCTTCGCATGTTAGTATTGTGAAGGAGATTTCAGAGTTTGTCTTAAAACGTTTGGAACATAAAAGCCCAATTGTGAAACAGAAGGCTTTAAGATTGATAAAGTATGTGGTTGGGAAGTCTGGTGTGGAGTTCAGAAGGGAAATGCAGAGACATTCAGTGGCGGTTCGTCAGTTGTTTCACTACAAGGGACAGTTGGATCCTTTGAAAGGTGATGCACTAAACAAGGCTGTGAGAGACACTGCTCACGAGGCTATCTCTGGCATCTTTTCAGAAGAAAATAGTAAGCCAGCACCTGCTGAAGATCTAAACCGGCGGATACAAGGGTTTGGGAATAAAAACTATGAACCGCCACAGGAGGATAAGAAATCTTTTATCAGTGAGGTTGTTGGTATTGGAAGCGCATCAATTAAGCAAGGGCTTAATAGCTTAACACAGGGACATTCGCTGATGAAAAATGATCCTGGCAGCTATAAGAGTCCAAATCTTCGGAGATCGTTGACCAATGAAACAGAACATGGTGACAGATATGAACCAGTTTCTTATCATAATGAAGCTCAGAGTAGTTTTGGAGGTTCAAAGAATCAATCCTCTGGTCCTTGGAATCAGGATTCAAGAGTAATAAAGACGGAAACATCAAATGGGGAATCTGGTGCAAGTTATGTAGGGAGTAAGACAAGAGAGGATAAGTTGCTGGAGACAATTGTAACTTCAGGAGGTGTTCGCCTGCAACCCACTCGAGATGCAATTCAAGCTTTCCTAGCAGAGGCTGCAAAGTTGGATGCACTGGCTTTATGTCATGCCCTTGAACTGAAGCTCCAATCTCCAATTTGGCAGGTTCGCATGAAAGCTGTTTGTGTCCTTGAGTCCATTCTTAGAAAGAAGGATGACGATCATTTTTCACGGGTGGAATCTTACTTCACAGAAAATAAAGATGTGGTGCTGAGATGTTCTGAATCTCCCCAAGTCTCTTTAAGGGAAAGGGCTGTGAAGGTTCTTGGTCTTTTAGGTGGAGGCCAGCCTAACAGCTCTCCAGTCAATTCAGAGAATGCCGTGAAAACAGACAATGCTGCTGTTGTGGAGCTGCCTAACTTGATAGACACTGGTGATTCAGATGATTATCATGGGACTGAGGACACTCTAAAGAGTACAACAGATCAAAATATATCAACTTTGACATCCACTCCTCTGGTTGATGATTTATTTGGAGATTTCAGCAGCTCTATTGGAGCTAGTCAAGAACACAAGAATGATGATGATCCATTTGCTGATGTTTCATTTCACACAAGTGAGAACAAAGAACATGCTGATGATCTCTTTTCTGGGATGACTGTTGGTAGTGATAAACAGAGCAATCACGAGAGTCACAGGCAGGAGAATATGAGTGTTCCTCAACTTTTTGACATATTTACTTCCAATTCTGAAGAAGGAAACCATACAGAGCTTGTTACTGATTTAATGGCCGGTCTATCCATGGATGCAAATACCTCAAGTACGAAGCAGAAGGGAACATCTCCTTTGATGCAATCTGAATCTTTATTTTCAGGCTTAACTGACCATATCCCTGGCAGTACTTCAGATGGCATGTTGACCTCTCAGCCAATGGGGTTCAATGTAAATCCCATGTTTCCTACTGGTGCTCTGCCTTTTAACATGCAGCAAGGTTTCAATTTGAACCAACCTTATCCTTCCCAGCCTCTTAATTACGGTGCCATGGAAACTCTTTTGGCTCAACAGCAATTCTTAGCAACTATGGCTAATTTCCAACACCTTAATAATATCAACATGCGAGATGATGGTGTTGCTCAAATGGCTGGTCCCAATGGAAGATCACCTTTGCCAGACATATTTCAACCAAATTTTCAAACTCAAACTCCTAGCTCAATGATCAATACCTCGAGGAAAGAAGAAACAAAAGCATTTGACTTTATCTCTGTAAGTTTGGTGCAAATACTTTACAAGTACCTTCCAGTGGTTTAA 2100 0.421 MESSRRAVESYWRSRLIDSATSDEDKVTPVYKLEEISELLRSSHVSIVKEISEFVLKRLEHKSPIVKQKALRLIKYVVGKSGVEFRREMQRHSVAVRQLFHYKGQLDPLKGDALNKAVRDTAHEAISGIFSEENSKPAPAEDLNRRIQGFGNKNYEPPQEDKKSFISEVVGIGSASIKQGLNSLTQGHSLMKNDPGSYKSPNLRRSLTNETEHGDRYEPVSYHNEAQSSFGGSKNQSSGPWNQDSRVIKTETSNGESGASYVGSKTREDKLLETIVTSGGVRLQPTRDAIQAFLAEAAKLDALALCHALELKLQSPIWQVRMKAVCVLESILRKKDDDHFSRVESYFTENKDVVLRCSESPQVSLRERAVKVLGLLGGGQPNSSPVNSENAVKTDNAAVVELPNLIDTGDSDDYHGTEDTLKSTTDQNISTLTSTPLVDDLFGDFSSSIGASQEHKNDDDPFADVSFHTSENKEHADDLFSGMTVGSDKQSNHESHRQENMSVPQLFDIFTSNSEEGNHTELVTDLMAGLSMDANTSSTKQKGTSPLMQSESLFSGLTDHIPGSTSDGMLTSQPMGFNVNPMFPTGALPFNMQQGFNLNQPYPSQPLNYGAMETLLAQQQFLATMANFQHLNNINMRDDGVAQMAGPNGRSPLPDIFQPNFQTQTPSSMINTSRKEETKAFDFISVSLVQILYKYLPVV* 700
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu10g00546 699 Gene3D - 2 139 IPR008942 -
Lapu10g00546 699 MobiDBLite consensus disorder prediction 480 499 - -
Lapu10g00546 699 PANTHER UNCHARACTERIZED 5 686 IPR039273 -
Lapu10g00546 699 CDD ENTH_like_Tepsin 13 132 IPR035802 -
Lapu10g00546 699 SUPERFAMILY ARM repeat 38 377 IPR016024 -
Lapu10g00546 699 ProSiteProfiles VHS domain profile. 20 89 IPR002014 GO:0035091|GO:0043130
Lapu10g00546 699 SMART VHS_2 13 148 IPR002014 GO:0035091|GO:0043130
Lapu10g00546 699 Pfam ENTH domain 16 127 IPR013809 -
Lapu10g00546 699 MobiDBLite consensus disorder prediction 225 244 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu10g00546 Lapu-Chr10 7767690 7772770 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu10g00546 - - gmx:100790466 1192.56
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu10g00546 10 7767690 7772770 Lapu10g00546 10 7767690 7772770 ECH