Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu10g00540 ATGGTGGGTGAACAGAGAATAGCAGAGGAGATCTTACAGGAGTCCAAGGTGGCGGCGTTAGAGACCAGTGGCACAATGAGCGGACCCCTCGTCGGAGCCGCCGCCAGGACCCACCGCCGCCGGAGGGTGGAGGCTATGCAACTGGTTCTGAGAGGGTTGTGCATGGCCTCCTCTGTTGTTTCAATCTCACTCATGGTCACTGCTAAGGAATCTAGTTCTGTCAGCATTTATGGCTTTCAATTACCTCTTCACTCTAAGTGGTCTTTCTCTGAGTCATACGAATATCTTGTTGGGGTTTCTGCTGCTGTTGCAGCTCATTCCTTACTTCAACTGCTCATTGGCATATCCAGATTTCTTAGGACATCTTCTGTGATTCCTTCCAGAAATCATGCATGGCTTATTTTTGCTGGGGATCAGGTATTTGCTTATGCACTGATGAGTGCTGGGTCAGCTGCATCTGGGGTGACCAATCTGAATCGCACAGGAATTAGACACACGGCTCTACCAAACTTTTGCAAGCCTTTGCACAAGTTTTGTGACCATGTTGGCATCTCAATAGCCTTCACTTTCACCAGCTGTTTTTTGCTGGCTACATCTGCTGTCCAAGATGTAATATGGCTCTCCCAACACTGA 633 0.4866 MVGEQRIAEEILQESKVAALETSGTMSGPLVGAAARTHRRRRVEAMQLVLRGLCMASSVVSISLMVTAKESSSVSIYGFQLPLHSKWSFSESYEYLVGVSAAVAAHSLLQLLIGISRFLRTSSVIPSRNHAWLIFAGDQVFAYALMSAGSAASGVTNLNRTGIRHTALPNFCKPLHKFCDHVGISIAFTFTSCFLLATSAVQDVIWLSQH* 211
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu10g00540 210 PANTHER CASP-LIKE PROTEIN 4A4 33 205 - -
Lapu10g00540 210 NCBIfam plant integral membrane protein TIGR01569 48 198 IPR006459 -
Lapu10g00540 210 Pfam Casparian strip membrane protein domain 41 194 IPR006702 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu10g00540 41 210 Miscellaneous Gene Families AT3G16300 52.353 1.43e-56 176
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu10g00540 - - pvu:PHAVU_010G146500g 385.956
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu10g00540 10 7724344 7727150 Lapu10g00540 10 7724344 7727150 ECH