Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu10g00529 ATGGCCTCATACAGGCCCTTCCCTCCTCAATCGAGTCAAATTCAAAACCCTATTCCTAGTGGGAATCATCAGTATACTAATAATAATCAAAATTGGGGTGCTTATGGAGATCCCTCTAATGCTTCATTCCCCCAAATCCCTCCAAATTCCAATTATCATCATCAGCAACAACAACATCAAAATCAACATCATGCTCCATATGCACCTCCAAATCCTCATCACCCTCGCTATCCATATCCACCACCACCTCCACCGCCACCGCCGGAGGCTTCATACCAGCCTCCGCCGCCGCCACCTCCCATGTACTATCCCCCTAATAACCAGTATAACAACCAGCCACCTCCGCCACCACCGCCGTTGTCGCCGCCGCCGCCCCCTCCCCCTGCTTCGCCTCCTCCTCCTCCCCCAGCAACTCAGAACAAAGAAGAGAGGCGCTTCAAGGATCCTTCCACGTCCGGCCGCCGCGAATATGATCCTTCCAATCATGGCATTGCTCACAAGCAGCATGAGCAGCAGCCTCCCGTGCCAGGGAAGAAGGTGAATGGGCCTCCTGGCAGAACTGAGACTGAGGAAGAAAAGAGGTTGAGGAAGAAGAGGGAGTTTGAGAAGCAGAGGCAGGAGGAAAAACATAGGCAGCACCTCAAGGAGTCCCAGAACAGTGTTCTGCAGAAGACTCACCTGTTGTCGTCTGGGAAGGGGCACGGTTTGATTGCAGGGTCTCGAATGGGAGAGAGGAGATCCACTCCCTTGTTGAGTGCCGAGAGGGTTGAAAATAGGTTGAAGAAACCCACAACATTTTTGTGTAAGCTCAAATTTCGAAATGAACTTCCAGATCCAAGTGCTCAACCTAAGCTTATGGCTTTCAAGAAAGATAAAGATCAATATGCAAAATATACAATCACATCCCTGGAGAAAATGTACAAACCCAAGCTTTTTGTGGAGCCAGATCTAGGGATACCTTTGGACCTGCTTGATCTCAGTGTTTACAATCCTCCCAGTGTCAGACAATCCCTTGCTCCAGAAGATGAAGAACTGTTGCGGGATGATGAAGCTGCTACACCTATAAAGAAAGATGGCATAAAAAGAAAAGAGAGGCCTACTGATAAAGGTGTGGCATGGCTTGTCAAAACACAATATATATCCCCTCTAAGCATGGAGTCGACAAAACAGTCTTTAACTGAAAAACAAGCTAAGGACCTGAGAGAGATGAAGGGCCGCGGCATTTTGGACAGTCTCAACAGTAGGGAAAGACAAATCAGGGAAATTGAAGCATCGTTTGAAGCAGCTAAGTCTGATCCTGTTCATGCAACCAACAAAGATTTGTATCCTGTTGAGATTATGCCATTACTGCCCGATTTTGATAGGTACGAGGATCAGTTTGTTGTTGCTGCATTTGATAATGCTCCCACAGCCGATTCAGAAATGTATTCTAAGATGGACAAATCTGTTCGTGATGCATTTGAATCAAAGGCAGTTATGAAAAGTTATGTTGCAACAAGTTCAGATCCTGCTAATCCTGAGAAGTTTTTGGCATATATGGCCCCAGCACCTGGAGAGCTGTCAAAGGATATATATGATGAAAATGAGGATGTCTCATACTCTTGGATTCGCGAGTATCATTGGGATGTTCGGGGTGATGATGCAGACGATCCTACAACATTCTTGGTTGCGTTTGATGACTCAGAAGCACGTTACTTGCCTCTTCCAACTAAACTTGTTTTAAGAAAAAAGAGGGCTAAAGAGGGAAGATCAGGTGAAGAGGTTGAGCAATGTCTAGTACCTTCAAGAGTGACTGTAAGACGGAGGTCTAGCGTCGCTGCGATTGAGCGGAAGGATACTGGGGTTTATACGAGTTCAAGGGGCAATTCCTCAAAGAGAGCTCGTCTAGAAATGGACGATGGTCTAGAACACCATCATAGAGGTGCTTCACACCAGGACAACTATCAGTCTAGTGGAGCAGAAGATTACATGTCTGAGTGA 1980 0.4662 MASYRPFPPQSSQIQNPIPSGNHQYTNNNQNWGAYGDPSNASFPQIPPNSNYHHQQQQHQNQHHAPYAPPNPHHPRYPYPPPPPPPPPEASYQPPPPPPPMYYPPNNQYNNQPPPPPPPLSPPPPPPPASPPPPPPATQNKEERRFKDPSTSGRREYDPSNHGIAHKQHEQQPPVPGKKVNGPPGRTETEEEKRLRKKREFEKQRQEEKHRQHLKESQNSVLQKTHLLSSGKGHGLIAGSRMGERRSTPLLSAERVENRLKKPTTFLCKLKFRNELPDPSAQPKLMAFKKDKDQYAKYTITSLEKMYKPKLFVEPDLGIPLDLLDLSVYNPPSVRQSLAPEDEELLRDDEAATPIKKDGIKRKERPTDKGVAWLVKTQYISPLSMESTKQSLTEKQAKDLREMKGRGILDSLNSRERQIREIEASFEAAKSDPVHATNKDLYPVEIMPLLPDFDRYEDQFVVAAFDNAPTADSEMYSKMDKSVRDAFESKAVMKSYVATSSDPANPEKFLAYMAPAPGELSKDIYDENEDVSYSWIREYHWDVRGDDADDPTTFLVAFDDSEARYLPLPTKLVLRKKRAKEGRSGEEVEQCLVPSRVTVRRRSSVAAIERKDTGVYTSSRGNSSKRARLEMDDGLEHHHRGASHQDNYQSSGAEDYMSE* 660
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu10g00529 659 PRINTS Proline rich extensin signature 63 84 - -
Lapu10g00529 659 PRINTS Proline rich extensin signature 115 140 - -
Lapu10g00529 659 PRINTS Proline rich extensin signature 84 100 - -
Lapu10g00529 659 MobiDBLite consensus disorder prediction 140 165 - -
Lapu10g00529 659 MobiDBLite consensus disorder prediction 1 256 - -
Lapu10g00529 659 Pfam Paf1 266 603 IPR007133 GO:0006368|GO:0016570|GO:0016593
Lapu10g00529 659 SUPERFAMILY Formin homology 2 domain (FH2 domain) 123 136 - -
Lapu10g00529 659 MobiDBLite consensus disorder prediction 184 217 - -
Lapu10g00529 659 PANTHER RNA POLYMERASE II-ASSOCIATED FACTOR 1 HOMOLOG 238 659 IPR007133 GO:0006368|GO:0016570|GO:0016593
Lapu10g00529 659 MobiDBLite consensus disorder prediction 68 139 - -
Lapu10g00529 659 MobiDBLite consensus disorder prediction 1 65 - -
Lapu10g00529 659 MobiDBLite consensus disorder prediction 645 659 - -
Lapu10g00529 659 MobiDBLite consensus disorder prediction 625 644 - -
Lapu10g00529 659 Coils Coil 412 432 - -
Lapu10g00529 659 MobiDBLite consensus disorder prediction 610 659 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu10g00529 K15174 - gmx:100800148 900.197
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu10g00529 10 7610775 7615271 Lapu10g00529 10 7610775 7615271 ECH