Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu10g00526 ATGAGGAAGGTGGTGGTGTGTGCGACGGTGATCGGAGCCGCGACGGCGTGTGCGGTGGGTGCGGTGGTGGTGCAGAGGTACGTGAGGAAATGTCGACTGTGGGGAAGAGCCATGGAAATATTGCAAGAATTGGAGGAGAAGTGTGCGACGCCGACGTGGAAGCTGAAGCGGGTTGCGGATGCCATGAACGTGGAGATGCACGCTGGCCTTGCTTCCGAAGGTGGTAGCAAGCTCAAGATGCTCATCACCTACGTCGATAAGCTCCCAACTGGGAATGAGGAAGGACTATATTATGCATTGGACCTTGGAGGGACTAATTTTCGGGTGCTACGTGTGCAATTGGGAGGCAAGGATGGTGGTATCGTCAGTCAAGAATTTACTGAGGTGTCAATTCCTCCTAATTTGATGGTTGGGACATCAGATGCACTCTTTGACTATATTGCAGCAGAACTTGGAAAATTTGTTGCCCAAGAGAGTCAAGATTTTCAAGTTCCTCCAGGTAGACAGAGAGAGATAGGTTTTACCTTTTCCTTTCCTGTCATGCAAACGTTAATTGATTCTGGGAACCTTATCAAGTGGACAAAAGGCTTCAACATAGAGGACGCTGTAAATCCCGTTGGTCAAGATATTGTGGCAGAATTAATGAAAGCCATTCGGAAACGGGGTCTTGATATGCGTGTAACTGCTCTGGTCAATGATACAGTTGGGACATTAGCTGGAGGTCGATATACAAACAACAATGTCATTGCTGCTATTATTTTAGGAACTGGAACAAATGCTGCCTATGTGGAGCGTGTTCAAGCAATACCAAAATGGCATGGTTCTTTGCCAGATTCTGGGGAAATGGTTATCAACATGGAGTGGGGAAACTTTCGGTCATCACACCTTCCATTAACTGAGTATGATCATGCATTAGATGCTGAGAGTTTAAACCCTGGTGAACAGATTTTTGAGAAGATAATTTCTGGCATGTACTTGGGAGAAATTGTTCGTAGAGTACTATTCAAAATGGCCGAAGAAGCTTTACTTTTTGGTGACAGTGTTCCCCCAAAGCTAAAAGATCCGTTCATATTAAGGACACCTGACATGTCTGCAATGCATCATGATTCGTCTGCTGATCTGAATGTGGTTGGGAGCAAACTGAAAAACGTTTTCGAGATATCTGATACCTCCCTGGAAGTGAGGAAGGTGGTTGTAGAGATCTGCAATATTGTTGCTACCCGTGGTGCTCGTCTTTCTGCTGCTGGTATCTTAGGTATCTTGAAGAAGTTGGGAAAAGACACTATCAGTGATGTTGAGGGTGAGAAAAATGTGATAGCCATGGATGGTGGATTGTATGAGCACTATACTGAGTATAGCAAGTGCCTAGAGAATACAGTTAAAGAATTGGTAGGTGAAGATGTCTCAGAAAGTATCAGCATTGAGCATTCCAATGATGGTTCAGGAATTGGTGCTGCCCTTCTTGCAGCCTCTCACTCTCAGTACCTTGATGGTTAA 1497 0.4516 MRKVVVCATVIGAATACAVGAVVVQRYVRKCRLWGRAMEILQELEEKCATPTWKLKRVADAMNVEMHAGLASEGGSKLKMLITYVDKLPTGNEEGLYYALDLGGTNFRVLRVQLGGKDGGIVSQEFTEVSIPPNLMVGTSDALFDYIAAELGKFVAQESQDFQVPPGRQREIGFTFSFPVMQTLIDSGNLIKWTKGFNIEDAVNPVGQDIVAELMKAIRKRGLDMRVTALVNDTVGTLAGGRYTNNNVIAAIILGTGTNAAYVERVQAIPKWHGSLPDSGEMVINMEWGNFRSSHLPLTEYDHALDAESLNPGEQIFEKIISGMYLGEIVRRVLFKMAEEALLFGDSVPPKLKDPFILRTPDMSAMHHDSSADLNVVGSKLKNVFEISDTSLEVRKVVVEICNIVATRGARLSAAGILGILKKLGKDTISDVEGEKNVIAMDGGLYEHYTEYSKCLENTVKELVGEDVSESISIEHSNDGSGIGAALLAASHSQYLDG* 499
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu10g00526 498 CDD NBD_sugar-kinase_HSP70_actin 99 264 - -
Lapu10g00526 498 ProSiteProfiles Hexokinase domain profile. 35 490 IPR001312 GO:0001678|GO:0004396|GO:0005524|GO:0005536|GO:0005975
Lapu10g00526 498 SUPERFAMILY Actin-like ATPase domain 27 245 IPR043129 -
Lapu10g00526 498 Gene3D - 83 489 - -
Lapu10g00526 498 ProSitePatterns Hexokinase domain signature. 172 197 IPR019807 GO:0004396|GO:0005524|GO:0006096
Lapu10g00526 498 Pfam Hexokinase 250 490 IPR022673 GO:0005524|GO:0005975|GO:0016773
Lapu10g00526 498 PANTHER HEXOKINASE 16 493 IPR001312 GO:0001678|GO:0004396|GO:0005524|GO:0005536|GO:0005975
Lapu10g00526 498 Pfam Hexokinase 41 243 IPR022672 GO:0005524|GO:0005975|GO:0016773
Lapu10g00526 498 FunFam Phosphotransferase 224 478 - -
Lapu10g00526 498 FunFam Phosphotransferase 83 254 - -
Lapu10g00526 498 Gene3D - 61 478 - -
Lapu10g00526 498 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 17 - -
Lapu10g00526 498 PRINTS Hexokinase family signature 250 264 - -
Lapu10g00526 498 PRINTS Hexokinase family signature 315 337 - -
Lapu10g00526 498 PRINTS Hexokinase family signature 227 243 - -
Lapu10g00526 498 PRINTS Hexokinase family signature 172 197 - -
Lapu10g00526 498 PRINTS Hexokinase family signature 398 420 - -
Lapu10g00526 498 PRINTS Hexokinase family signature 475 491 - -
Lapu10g00526 498 PRINTS Hexokinase family signature 98 114 - -
Lapu10g00526 498 SUPERFAMILY Actin-like ATPase domain 248 495 IPR043129 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu10g00526 Lapu-Chr10 7577827 7584871 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu10g00526 K00844 - gmx:100783775 827.009
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu10g00526 10 7577827 7584871 Lapu10g00526 10 7577827 7584871 ECH