Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu10g00499 ATGGGTAGCTCGGGAAAGTCGAACGTGAACGGAATCGATGCGTCGGTGGGTGGCTTGGTTTGGGTCCGACGAAGAAACGGGTCGTGGTGGCCGGGTCGGATATTGGGTCTTCACGAATTGTCGGAGAGTTGCTTGGTTTCTCCGAGATCGGGTACTCCCGTCAAGCTCTTAGGTCGTGAGGATGCAAGCGTGGATTGGTATAATCTTGAAAAATCAAAGCGGGTAAAGGCTTTTCGCTGTGGAGAGTATGATGAATGCATTGAGAAGGCAAAGGCATCAGCTGCTAATTCAAACAAGAAGGCAGTGAAATATGCTCGCAGGGAAGATGCCATTCTTCATGCTCTTGAACTAGAGAGTGCTCACCTGGACAAAGAATCATTAAGCTTATGCTCTGGATTAGATAAACCTGGTAGTGAACATGGAGGATCAGCTGGGGAATTACCACTCATGTCTAATTCTGAAGATGTGACTGGTGATCTGAGTGACTCTGATGACAATTCTAATTCAGCCCCAGAATTGTCACAATCTGTTATATCTTTTGAAGTGCCTAATCACAATGGTTCTTTAAAGATGCATTCTGTGCAAGGAAGGAGGAGAAGAACACCTAATGATTCAGAAGATGATGGATCTGAAGGAGTCAAGCGAATGAGAGGACTTGAGGACTTGGGCATTGGTGTAGTGTCAAAGAAAAAGGTCCAAGGTACAGGTGCAACTGAGATTGGTCAGCACATTAGTGCTTCACTCAACAATTCTGCCACAGGGAATTGCCTGGCAAATGGAACATCTGTAAATGGTGGTAAAGGTTATTCTTCAACATTGAAAAGGAAGAGATCACAAGTGGCAAATGTTCACGAGTTATTGAAAAGGAAAAATAGGCGCCGGCCCTTGACTAAAGTTTTGGAGAGTACAGCCATGGTGTCAGTTCCTGTCATTTGTGATCAACTTCCCAGTTCAAACAGTTCTCCACTACGTGGGATAACCAATGGAAGAATTTCAGGATTAGATTCTAATGATTCAAAGAAAACTTTTCCACTGTCAACACATAATTCAGATAGTACTGACGCTGCCTGTGAGAATGGGACTTCATTAATTGTTCATGACCATGGTAGTGGAGATGATGGTTCACAAATCAATCATGGGGTCAAGGAGAATGAAACTTCTGGCCAACCAGGGCTAGTTGGCAAAGATTCTCCTGATAAACTATTTGATGTGCCATTTGTTGGGGTTCTAGGGGAGGAGAAACACACTCCTGATTTCTCACCCGTGCTGGTTTCTTGTTCACCTGACAAGCCTCAAGTTAGTGCATTGGGACAGCAGTCTTGTAATGTTAATCAATGTGAAGCTGTGCCATTGAGAGATGAGAGCAAGAACGAACCTGGTTGTACCAGTTCAGCGGCTGGTCACAATATTGTTGGCCATAGACAAGACAAAGGTAGTTCAAAGTGGCAGTCAAAAGGAAAGAGGAATTCAAGACATACAAATAAAAATATAAAACATGTCTCAAGAAAATATGTGGACACAGACCACCAAGCCAGTGCTTATTTGCCTGGAATAGGAAATTCAGATGGAACTTACCAGGGTACTGGTTCAAAAGTTGATTGGAATGGCGTGGGTGCACCACATACTTCATACAATTGTAATTCTCAAGTTAAATGCAAACCTGTTGCGGAAGGCCAACTAGAAGGATTTCGGGACTTAAACAAGCATATCAAGGGTACAACAACGGAGGCAAAGCTATTACCTGATGGATCTCTCCCACCTCAAAGATTACTTCCTTATCGCCATTCACGCTTCACTGTGAACTCCAGATATCAAATGGCAGATTTCCCTGGAAGAAACTATTGTTCTGATGCTTCGTTATATGATGTTAAGCTAGAAGTTAAATCCAGCTACCGGCCACAGCACGTTCCTTTGGTTTCTCTTGTGAGTAAACTGAATGGCAAAGCCTTTATCGGGCACCCTTTGACGGTTGAGGTTTTGGAAGAGGGTCACTGTGATAAAATGTTGAGGGGCATTGGATGTGACTTGGAAGCTGGTGATGTCTTTTGCATGGCCAAGCCTAACTTGGTAACTGGGAGACTACATTCCAAAAATTCATCACGTTTTTCACCTAAATCTTCCAAGATGAAGAAAACCGGGCTGATGAATAAAAAGATTAGGAAATTGTCGTCATTGACAGGTCACAGACAGTCAGAAGAGGAGAGAAAACCAGTGGTAGATAAGCTGAAGGGCCCTGTCATAGCTTGTATTCCCCTTAAAGTAGTGTTCAGTAGGATAAATGAAGCAGTGAGTGGTCAGGCACGGTCGACGCACCGTGCATTACCAACATCATCCACCAACCCATGA 2346 0.4378 MGSSGKSNVNGIDASVGGLVWVRRRNGSWWPGRILGLHELSESCLVSPRSGTPVKLLGREDASVDWYNLEKSKRVKAFRCGEYDECIEKAKASAANSNKKAVKYARREDAILHALELESAHLDKESLSLCSGLDKPGSEHGGSAGELPLMSNSEDVTGDLSDSDDNSNSAPELSQSVISFEVPNHNGSLKMHSVQGRRRRTPNDSEDDGSEGVKRMRGLEDLGIGVVSKKKVQGTGATEIGQHISASLNNSATGNCLANGTSVNGGKGYSSTLKRKRSQVANVHELLKRKNRRRPLTKVLESTAMVSVPVICDQLPSSNSSPLRGITNGRISGLDSNDSKKTFPLSTHNSDSTDAACENGTSLIVHDHGSGDDGSQINHGVKENETSGQPGLVGKDSPDKLFDVPFVGVLGEEKHTPDFSPVLVSCSPDKPQVSALGQQSCNVNQCEAVPLRDESKNEPGCTSSAAGHNIVGHRQDKGSSKWQSKGKRNSRHTNKNIKHVSRKYVDTDHQASAYLPGIGNSDGTYQGTGSKVDWNGVGAPHTSYNCNSQVKCKPVAEGQLEGFRDLNKHIKGTTTEAKLLPDGSLPPQRLLPYRHSRFTVNSRYQMADFPGRNYCSDASLYDVKLEVKSSYRPQHVPLVSLVSKLNGKAFIGHPLTVEVLEEGHCDKMLRGIGCDLEAGDVFCMAKPNLVTGRLHSKNSSRFSPKSSKMKKTGLMNKKIRKLSSLTGHRQSEEERKPVVDKLKGPVIACIPLKVVFSRINEAVSGQARSTHRALPTSSTNP* 782
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu10g00499 781 MobiDBLite consensus disorder prediction 484 498 - -
Lapu10g00499 781 MobiDBLite consensus disorder prediction 453 500 - -
Lapu10g00499 781 PANTHER T17B22.17 PROTEIN-RELATED 1 777 IPR044679 -
Lapu10g00499 781 ProSiteProfiles PWWP domain profile. 16 71 IPR000313 -
Lapu10g00499 781 CDD PWWP 17 108 - -
Lapu10g00499 781 Pfam PWWP domain 18 107 IPR000313 -
Lapu10g00499 781 Gene3D - 5 119 - -
Lapu10g00499 781 MobiDBLite consensus disorder prediction 197 214 - -
Lapu10g00499 781 MobiDBLite consensus disorder prediction 133 214 - -
Lapu10g00499 781 MobiDBLite consensus disorder prediction 370 397 - -
Lapu10g00499 781 MobiDBLite consensus disorder prediction 330 354 - -
Lapu10g00499 781 MobiDBLite consensus disorder prediction 154 191 - -
Lapu10g00499 781 SUPERFAMILY Tudor/PWWP/MBT 14 118 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu10g00499 Lapu-Chr10 7364127 7369370 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu10g00499 - - gmx:100817435 1354.35
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu10g00499 10 7364127 7369370 Lapu10g00499 10 7364127 7369370 ECH