Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu10g00490 ATGTCTGGAATCGTGGTTGTTTTCGACTTCGACAAGACCATTGTCGATGTCGACAGCGACAACTGGGTGATCGACGAATTGGGTTTCACTGATTTGTTCAACCAGCTTCTCCCCACCATGCCTTGGAACACTCTCATGGACACAATGATGATGGAGCTTCATTCACATGGTAAAACCATTAAGGACATTGAAGAGGTTCTGCATAAGATTCCCTTGCACCCCAGAGTAATACCTGCTATCAAAGCAGCTCATGCTTTTGGGTGTGATTTGAGGATTGTGAGTGATGCAAACACGTTTTTCATTGAGACTATTTTGAAGCATTTGGGAATAAGGGAATATTTCTCAGAGATCAATACTAACCCGGGTTATGTGAATGAAGAAGGAATGTTAAGGATTCTACCTTACCATGACTTCAACAAAGCTTCCCATGGCTGCAGTTTGTGCCCTCCAAACATGTGCAAGGGTTTAGTGATAGAGAGAATCCAAGATTCAATATCAGAAGAGGAAAAGAAGAGATTCATCTATCTTGGGGATGGTAGTGGAGACTATTGCCCAAGTTTGAGGCTGAAAGAGAAGGACTTTATGATGCCAAGGAAGAACTTTCCGGTGTGGGACTTGATATGCAAAGACCCTTCAGTTGTTAAGGCTGAAATCCATGGATGGAGTGATGGAGAAGAACTTGAACAAGTTTTGATGCAGTTGATCAACAAAATAGCAATGGACCAAAATTCTCCCTTCATTTCCTCTGATTGCAAGCTTCAGACTCTCTCACTCTCTGCTTTAGAGGCTTTGCCCAAAGTCCTACCAGTTCGGCCATAA 819 0.4286 MSGIVVVFDFDKTIVDVDSDNWVIDELGFTDLFNQLLPTMPWNTLMDTMMMELHSHGKTIKDIEEVLHKIPLHPRVIPAIKAAHAFGCDLRIVSDANTFFIETILKHLGIREYFSEINTNPGYVNEEGMLRILPYHDFNKASHGCSLCPPNMCKGLVIERIQDSISEEEKKRFIYLGDGSGDYCPSLRLKEKDFMMPRKNFPVWDLICKDPSVVKAEIHGWSDGEELEQVLMQLINKIAMDQNSPFISSDCKLQTLSLSALEALPKVLPVRP* 273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu10g00490 272 PIRSF PLP_phosphatas_PHOSPHO2 1 239 IPR016965 GO:0016791
Lapu10g00490 272 Pfam Putative Phosphatase 4 235 IPR016965 GO:0016791
Lapu10g00490 272 NCBIfam HAD-IB family phosphatase 5 187 - -
Lapu10g00490 272 PANTHER PHOSPHATASE, ORPHAN 1, 2 1 242 IPR016965 GO:0016791
Lapu10g00490 272 Gene3D - 2 189 IPR023214 -
Lapu10g00490 272 SUPERFAMILY HAD-like 4 190 IPR036412 -
Lapu10g00490 272 NCBIfam MtnX-like HAD-IB family phosphatase 4 199 IPR006384 GO:0016791
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu10g00490 Lapu-Chr10 7252144 7254030 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu10g00490 K13248 - gmx:100785878 510.76