Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu10g00472 ATGGCTACAGTTGGTTCACTCAAATTCTTGTTGTGCCTAGTTCTATGGCTCTGGAACTTTCTTCCTTCCTGTCAAGGTAGTAAGCACTGGCATGAAAATAGATACCCTTTTATCAGAAATGCAAGCTCATTCTCATCACCATCAATTTCAACTACCACCTCCAGTAATGTGTATGACTACATAATAGTGGGAGGTGGCACAGCAGGGTGTCCTTTGGCTGCAACCCTCTCTCAGAATTTCAGAGTTCTGGTGCTTGAAAGAGGGGGTGTTCCCTTCACCAACCCCAATGTTTCATTTCTAGAAAACTTTCACATTACTCTGGCAGACATTTCAGCAACTTCAGCTTCTCAATACTTCATTTCAACTGATGGAGTCTACAATTCAAGGGCCAGGGTCTTAGGAGGTGGCACTTCTATCAATGCTGGCTTCTACACTAGAGCAAATCCAAGGTTTATAAAGAAGGTGGGCTGGGATGCCAAGCTAGTAAATGAGTCATATCCATGGGTTGAAAAGCAAATTGTTCACCGTCCAAAGTTTTCACCTTATCAAAGAGCAGTGAGGGACAGTCTTCTAGACTCTGGTGTATCACCTTTTAATGGCTTCACCTATGATCATCTCTATGGAACAAAAGTTGGTGGAACCATTTTTGACAGATTTGGCCGCCGCCACACAGCTGCGGAACTGCTTGCTTCTGGGGACCATGACAAACTTACTGTTTTGGTCTATGCCACTGTCCAAAAGATTGTGTTTGATACACAAGGAATGAAACCAAAAGCTGTAGGGGTTATTTTCCAAGATGAAAATGGGAAACAGCATGAAGCTATTCTTGCAAATGATAACCACAGTGAAGTGATAATGTCTACTGGGGCAATAGGGACTCCTCAATTGCTAATGCTTAGTGGAATTGGACCAAAAGAAGAACTCCAGAAGTTGAACATCCCAGTGGTCCTTGATAACCAGTTTGTTGGGAAGGGAATTGTAGACAATCCCATGAACACAATGTTTGTTCCTTCTGAAAGACCAGTTCATCAGTCACTCATAGAAACTGTTGGAATCACCAAGATGGGTGTGTACATTGAGGCTAGCAGTGGGTTTAGTCAGTCCAATGATAGCATTCACTGCCACCATGGTATCATGTCAGCTGAGATTGGGCAGCTGTCCACAATTCCTCCCAAGCAAAGATCACCAAAAGCTGTTCAAGAATTTATCAAGAACAAGAAAGACCTACCGATTGAAGCATTTAAGGGAGGCTTTATTTTGTCAAAAGTTGCCAATCCTTGGTCAGTTGGTGAGCTCAAGCTGGTCAACACCAATGTGAATGACAACCCAGCTGTTACCTTCAACTACTTCAGTCATCCATACGATCTTGAGCGCTGCGTTAAGGGAATCCGCTTGGCCATTAAGGTTGTCCAGTCCAAACACTTCACAAACTACACTTTGTGTGACAGAAAAACTGCAGAGGAACTGCTCAACCTCACTGTGAAGGCTAATGTCAACTTCATACCCAAACATCCCAAAGACACAAAGTCACTAAAGCAGTTCTGCAAAGACACTGTGATCACAATTTGGCACTACCATGGAGGGTGCCATGTGGGTAAGGTAGTCAGCCCTGATTACATGGTCCTTGGTGTTGACAGACTCCGGGTGGTTGATGGTTCAACATTTGATGAATCACCTGGAACAAATCCTCAAGCCACTGTCATGATGATGGGCAGGTACATGGGACTGAAGATTTTGAGAGACAGGTTGGGGAAATTGTCTGGTATATAA 1770 0.4373 MATVGSLKFLLCLVLWLWNFLPSCQGSKHWHENRYPFIRNASSFSSPSISTTTSSNVYDYIIVGGGTAGCPLAATLSQNFRVLVLERGGVPFTNPNVSFLENFHITLADISATSASQYFISTDGVYNSRARVLGGGTSINAGFYTRANPRFIKKVGWDAKLVNESYPWVEKQIVHRPKFSPYQRAVRDSLLDSGVSPFNGFTYDHLYGTKVGGTIFDRFGRRHTAAELLASGDHDKLTVLVYATVQKIVFDTQGMKPKAVGVIFQDENGKQHEAILANDNHSEVIMSTGAIGTPQLLMLSGIGPKEELQKLNIPVVLDNQFVGKGIVDNPMNTMFVPSERPVHQSLIETVGITKMGVYIEASSGFSQSNDSIHCHHGIMSAEIGQLSTIPPKQRSPKAVQEFIKNKKDLPIEAFKGGFILSKVANPWSVGELKLVNTNVNDNPAVTFNYFSHPYDLERCVKGIRLAIKVVQSKHFTNYTLCDRKTAEELLNLTVKANVNFIPKHPKDTKSLKQFCKDTVITIWHYHGGCHVGKVVSPDYMVLGVDRLRVVDGSTFDESPGTNPQATVMMMGRYMGLKILRDRLGKLSGI* 590
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu10g00472 589 ProSitePatterns GMC oxidoreductases signature 2. 289 303 IPR000172 GO:0016614|GO:0050660
Lapu10g00472 589 SUPERFAMILY FAD/NAD(P)-binding domain 50 581 IPR036188 -
Lapu10g00472 589 Pfam GMC oxidoreductase 58 330 IPR000172 GO:0016614|GO:0050660
Lapu10g00472 589 Pfam GMC oxidoreductase 426 572 IPR007867 GO:0016614
Lapu10g00472 589 Gene3D - 175 521 - -
Lapu10g00472 589 PIRSF Alcohol_oxidase 38 588 IPR012132 GO:0050660
Lapu10g00472 589 Gene3D - 58 571 IPR036188 -
Lapu10g00472 589 PANTHER OSJNBA0019K04.7 PROTEIN 20 583 - -
Lapu10g00472 589 SUPERFAMILY FAD-linked reductases, C-terminal domain 327 528 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu10g00472 Lapu-Chr10 7076600 7084217 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu10g00472 14 582 Miscellaneous Gene Families AT5G51950 49.743 0.0 539
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu10g00472 K15403 - gmx:100788704 1093.18