Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu10g00453 ATGGCATCTCAAGGTTTGTGTCCTTCTATAAAAAATATTCTTCTTTTGGATTCTGAAGGGAAACGTGTGGCAGTCAAGTATTACTCAGATGACTGGCCAACAAACAATGCCAAGTTAGCTTTTGAGAAGTTTGTATTTAGTAAGACTGTTAAGACAAATGCTCGTACGGAAGCTGAGGTAACACTACTTGAGAACAATATCATTATTTACAAATTTGTACAAGACTTGCATTTCTTTGTTACTGGTGGTGATGATGAAAATGAGCTCATTTTAGCATCGGTACTTCAAGGTTTCTTTGATGCAGTCACCCTTCTATTGAGGAGCAATGTTGACAAAAGAGAGGCACTTGAGAACTTGGATCTCATTCTGTTGTGTCTTGATGAGATTGTTGATGGAGGGATGATACTTGAAACAAATGGACCTCTTATTGCTGAAAAAGTGACCTCTCATAGCTTGGATGCCGATGCCCCCTTGTCAGAGCAGACACTAACTCAAGCTTGGGCAACAGCCAGAGAACATTTGACAAGAACCCTTTTGAAATGA 543 0.3959 MASQGLCPSIKNILLLDSEGKRVAVKYYSDDWPTNNAKLAFEKFVFSKTVKTNARTEAEVTLLENNIIIYKFVQDLHFFVTGGDDENELILASVLQGFFDAVTLLLRSNVDKREALENLDLILLCLDEIVDGGMILETNGPLIAEKVTSHSLDADAPLSEQTLTQAWATAREHLTRTLLK* 181
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu10g00453 180 CDD Zeta-COP 11 146 - -
Lapu10g00453 180 SUPERFAMILY SNARE-like 10 151 IPR011012 -
Lapu10g00453 180 Gene3D - 4 150 - -
Lapu10g00453 180 FunFam Coatomer subunit zeta-2 4 150 - -
Lapu10g00453 180 PANTHER ZETA-COAT PROTEIN 6 179 IPR039652 GO:0006890|GO:0030126
Lapu10g00453 180 Pfam Clathrin adaptor complex small chain 10 149 IPR022775 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu10g00453 Lapu-Chr10 6912203 6916202 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu10g00453 K20472 - gmx:547466 338.576